Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGA9Q9Y5G4 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC15.99■□□□□ 0.15
PCDHGA9Q9Y5G4 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGA9Q9Y5G4 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGA9Q9Y5G4 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC15.99■□□□□ 0.15
PCDHGA9Q9Y5G4 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC15.99■□□□□ 0.15
PCDHGA9Q9Y5G4 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGA9Q9Y5G4 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHGA9Q9Y5G4 REM2-202ENST00000536884 1331 ntTSL 2 BASIC15.98■□□□□ 0.15
PCDHGA9Q9Y5G4 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC15.98■□□□□ 0.15
PCDHGA9Q9Y5G4 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHGA9Q9Y5G4 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHGA9Q9Y5G4 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHGA9Q9Y5G4 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHGA9Q9Y5G4 STOM-202ENST00000347359 870 ntTSL 2 BASIC15.98■□□□□ 0.15
PCDHGA9Q9Y5G4 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHGA9Q9Y5G4 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHGA9Q9Y5G4 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC15.98■□□□□ 0.15
PCDHGA9Q9Y5G4 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC15.98■□□□□ 0.15
PCDHGA9Q9Y5G4 FAM8A3P-201ENST00000427218 844 ntBASIC15.98■□□□□ 0.15
PCDHGA9Q9Y5G4 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC15.98■□□□□ 0.15
PCDHGA9Q9Y5G4 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHGA9Q9Y5G4 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHGA9Q9Y5G4 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC15.98■□□□□ 0.15
PCDHGA9Q9Y5G4 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC15.98■□□□□ 0.15
PCDHGA9Q9Y5G4 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC15.98■□□□□ 0.15
PCDHGA9Q9Y5G4 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
PCDHGA9Q9Y5G4 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC15.98■□□□□ 0.15
PCDHGA9Q9Y5G4 AC004835.2-201ENST00000603762 682 ntBASIC15.98■□□□□ 0.15
PCDHGA9Q9Y5G4 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
PCDHGA9Q9Y5G4 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHGA9Q9Y5G4 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHGA9Q9Y5G4 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC15.98■□□□□ 0.15
PCDHGA9Q9Y5G4 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHGA9Q9Y5G4 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC15.98■□□□□ 0.15
PCDHGA9Q9Y5G4 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHGA9Q9Y5G4 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC15.98■□□□□ 0.15
PCDHGA9Q9Y5G4 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
PCDHGA9Q9Y5G4 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
PCDHGA9Q9Y5G4 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHGA9Q9Y5G4 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHGA9Q9Y5G4 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHGA9Q9Y5G4 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC15.98■□□□□ 0.15
PCDHGA9Q9Y5G4 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC15.98■□□□□ 0.15
PCDHGA9Q9Y5G4 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHGA9Q9Y5G4 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGA9Q9Y5G4 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGA9Q9Y5G4 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC15.97■□□□□ 0.15
PCDHGA9Q9Y5G4 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
PCDHGA9Q9Y5G4 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC15.97■□□□□ 0.15
PCDHGA9Q9Y5G4 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC15.97■□□□□ 0.15
PCDHGA9Q9Y5G4 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC15.97■□□□□ 0.15
PCDHGA9Q9Y5G4 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGA9Q9Y5G4 AD000864.1-201ENST00000624076 2295 ntBASIC15.97■□□□□ 0.15
PCDHGA9Q9Y5G4 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGA9Q9Y5G4 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC15.97■□□□□ 0.15
PCDHGA9Q9Y5G4 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC15.97■□□□□ 0.15
PCDHGA9Q9Y5G4 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGA9Q9Y5G4 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGA9Q9Y5G4 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGA9Q9Y5G4 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGA9Q9Y5G4 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGA9Q9Y5G4 ACTG1P4-201ENST00000425123 1122 ntBASIC15.97■□□□□ 0.15
PCDHGA9Q9Y5G4 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC15.97■□□□□ 0.15
PCDHGA9Q9Y5G4 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC15.97■□□□□ 0.15
PCDHGA9Q9Y5G4 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC15.97■□□□□ 0.15
PCDHGA9Q9Y5G4 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC15.97■□□□□ 0.15
PCDHGA9Q9Y5G4 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
PCDHGA9Q9Y5G4 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC15.97■□□□□ 0.15
PCDHGA9Q9Y5G4 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC15.97■□□□□ 0.15
PCDHGA9Q9Y5G4 AC106028.4-201ENST00000614509 607 ntBASIC15.97■□□□□ 0.15
PCDHGA9Q9Y5G4 AC091812.2-201ENST00000619081 385 ntBASIC15.97■□□□□ 0.15
PCDHGA9Q9Y5G4 AL513210.1-201ENST00000629608 234 ntBASIC15.97■□□□□ 0.15
PCDHGA9Q9Y5G4 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC15.97■□□□□ 0.15
PCDHGA9Q9Y5G4 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGA9Q9Y5G4 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGA9Q9Y5G4 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGA9Q9Y5G4 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
PCDHGA9Q9Y5G4 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGA9Q9Y5G4 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGA9Q9Y5G4 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
PCDHGA9Q9Y5G4 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC15.97■□□□□ 0.15
PCDHGA9Q9Y5G4 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC15.97■□□□□ 0.15
PCDHGA9Q9Y5G4 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC15.97■□□□□ 0.15
PCDHGA9Q9Y5G4 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC15.97■□□□□ 0.15
PCDHGA9Q9Y5G4 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
PCDHGA9Q9Y5G4 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGA9Q9Y5G4 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGA9Q9Y5G4 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC15.97■□□□□ 0.15
PCDHGA9Q9Y5G4 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC15.97■□□□□ 0.15
PCDHGA9Q9Y5G4 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGA9Q9Y5G4 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
PCDHGA9Q9Y5G4 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
PCDHGA9Q9Y5G4 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGA9Q9Y5G4 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGA9Q9Y5G4 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGA9Q9Y5G4 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGA9Q9Y5G4 AC006116.8-202ENST00000587620 1550 ntBASIC15.96■□□□□ 0.15
PCDHGA9Q9Y5G4 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGA9Q9Y5G4 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms