Protein–RNA interactions for Protein: Q9Y2S0

POLR1D, DNA-directed RNA polymerases I and III subunit RPAC2, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1DQ9Y2S0 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
POLR1DQ9Y2S0 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC15.31■□□□□ 0.04
POLR1DQ9Y2S0 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
POLR1DQ9Y2S0 AL353593.2-201ENST00000602529 1483 ntBASIC15.31■□□□□ 0.04
POLR1DQ9Y2S0 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
POLR1DQ9Y2S0 AC009336.1-201ENST00000608941 1553 ntBASIC15.31■□□□□ 0.04
POLR1DQ9Y2S0 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
POLR1DQ9Y2S0 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
POLR1DQ9Y2S0 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC15.31■□□□□ 0.04
POLR1DQ9Y2S0 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC15.31■□□□□ 0.04
POLR1DQ9Y2S0 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
POLR1DQ9Y2S0 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
POLR1DQ9Y2S0 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.31■□□□□ 0.04
POLR1DQ9Y2S0 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
POLR1DQ9Y2S0 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
POLR1DQ9Y2S0 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC15.31■□□□□ 0.04
POLR1DQ9Y2S0 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
POLR1DQ9Y2S0 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
POLR1DQ9Y2S0 NF2-208ENST00000403435 2568 ntTSL 5 BASIC15.31■□□□□ 0.04
POLR1DQ9Y2S0 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC15.3■□□□□ 0.04
POLR1DQ9Y2S0 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
POLR1DQ9Y2S0 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC15.3■□□□□ 0.04
POLR1DQ9Y2S0 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
POLR1DQ9Y2S0 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.3■□□□□ 0.04
POLR1DQ9Y2S0 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
POLR1DQ9Y2S0 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
POLR1DQ9Y2S0 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
POLR1DQ9Y2S0 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC15.3■□□□□ 0.04
POLR1DQ9Y2S0 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
POLR1DQ9Y2S0 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
POLR1DQ9Y2S0 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
POLR1DQ9Y2S0 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
POLR1DQ9Y2S0 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
POLR1DQ9Y2S0 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
POLR1DQ9Y2S0 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
POLR1DQ9Y2S0 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC15.3■□□□□ 0.04
POLR1DQ9Y2S0 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
POLR1DQ9Y2S0 CTNS-203ENST00000399306 803 ntTSL 3 BASIC15.3■□□□□ 0.04
POLR1DQ9Y2S0 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
POLR1DQ9Y2S0 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC15.3■□□□□ 0.04
POLR1DQ9Y2S0 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC15.3■□□□□ 0.04
POLR1DQ9Y2S0 RHBDF1P1-201ENST00000427504 1941 ntBASIC15.3■□□□□ 0.04
POLR1DQ9Y2S0 AC060834.1-201ENST00000443027 2032 ntBASIC15.3■□□□□ 0.04
POLR1DQ9Y2S0 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
POLR1DQ9Y2S0 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC15.3■□□□□ 0.04
POLR1DQ9Y2S0 CDV3-207ENST00000508481 661 ntTSL 3 BASIC15.3■□□□□ 0.04
POLR1DQ9Y2S0 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC15.3■□□□□ 0.04
POLR1DQ9Y2S0 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
POLR1DQ9Y2S0 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC15.3■□□□□ 0.04
POLR1DQ9Y2S0 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC15.3■□□□□ 0.04
POLR1DQ9Y2S0 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC15.3■□□□□ 0.04
POLR1DQ9Y2S0 BNIP3P18-201ENST00000593976 575 ntBASIC15.3■□□□□ 0.04
POLR1DQ9Y2S0 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
POLR1DQ9Y2S0 AC099336.1-202ENST00000602961 463 ntBASIC15.3■□□□□ 0.04
POLR1DQ9Y2S0 AL445228.2-201ENST00000605589 952 ntBASIC15.3■□□□□ 0.04
POLR1DQ9Y2S0 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
POLR1DQ9Y2S0 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC15.3■□□□□ 0.04
POLR1DQ9Y2S0 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
POLR1DQ9Y2S0 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC15.3■□□□□ 0.04
POLR1DQ9Y2S0 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
POLR1DQ9Y2S0 AC114341.1-201ENST00000618070 349 ntBASIC15.3■□□□□ 0.04
POLR1DQ9Y2S0 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
POLR1DQ9Y2S0 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
POLR1DQ9Y2S0 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
POLR1DQ9Y2S0 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
POLR1DQ9Y2S0 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
POLR1DQ9Y2S0 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
POLR1DQ9Y2S0 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
POLR1DQ9Y2S0 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC15.29■□□□□ 0.04
POLR1DQ9Y2S0 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
POLR1DQ9Y2S0 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
POLR1DQ9Y2S0 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
POLR1DQ9Y2S0 LINC02012-201ENST00000608206 1725 ntBASIC15.29■□□□□ 0.04
POLR1DQ9Y2S0 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
POLR1DQ9Y2S0 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
POLR1DQ9Y2S0 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
POLR1DQ9Y2S0 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
POLR1DQ9Y2S0 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
POLR1DQ9Y2S0 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
POLR1DQ9Y2S0 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC15.29■□□□□ 0.04
POLR1DQ9Y2S0 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
POLR1DQ9Y2S0 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
POLR1DQ9Y2S0 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC15.29■□□□□ 0.04
POLR1DQ9Y2S0 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC15.29■□□□□ 0.04
POLR1DQ9Y2S0 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC15.29■□□□□ 0.04
POLR1DQ9Y2S0 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC15.29■□□□□ 0.04
POLR1DQ9Y2S0 AC012615.1-201ENST00000565797 1299 ntBASIC15.29■□□□□ 0.04
POLR1DQ9Y2S0 AC092329.2-201ENST00000598402 547 ntBASIC15.29■□□□□ 0.04
POLR1DQ9Y2S0 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC15.29■□□□□ 0.04
POLR1DQ9Y2S0 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
POLR1DQ9Y2S0 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
POLR1DQ9Y2S0 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
POLR1DQ9Y2S0 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
POLR1DQ9Y2S0 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.29■□□□□ 0.04
POLR1DQ9Y2S0 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
POLR1DQ9Y2S0 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
POLR1DQ9Y2S0 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
POLR1DQ9Y2S0 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC15.29■□□□□ 0.04
POLR1DQ9Y2S0 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
POLR1DQ9Y2S0 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms