Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
SSX2IPQ9Y2D8 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SSX2IPQ9Y2D8 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.36■□□□□ 0.53
SSX2IPQ9Y2D8 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SSX2IPQ9Y2D8 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
SSX2IPQ9Y2D8 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
SSX2IPQ9Y2D8 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SSX2IPQ9Y2D8 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SSX2IPQ9Y2D8 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SSX2IPQ9Y2D8 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SSX2IPQ9Y2D8 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SSX2IPQ9Y2D8 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SSX2IPQ9Y2D8 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SSX2IPQ9Y2D8 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.36■□□□□ 0.53
SSX2IPQ9Y2D8 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SSX2IPQ9Y2D8 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SSX2IPQ9Y2D8 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC18.36■□□□□ 0.53
SSX2IPQ9Y2D8 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.36■□□□□ 0.53
SSX2IPQ9Y2D8 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SSX2IPQ9Y2D8 PNMT-202ENST00000394246 821 ntTSL 2 BASIC18.36■□□□□ 0.53
SSX2IPQ9Y2D8 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
SSX2IPQ9Y2D8 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC18.36■□□□□ 0.53
SSX2IPQ9Y2D8 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SSX2IPQ9Y2D8 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC18.36■□□□□ 0.53
SSX2IPQ9Y2D8 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SSX2IPQ9Y2D8 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC18.36■□□□□ 0.53
SSX2IPQ9Y2D8 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
SSX2IPQ9Y2D8 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC18.36■□□□□ 0.53
SSX2IPQ9Y2D8 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.36■□□□□ 0.53
SSX2IPQ9Y2D8 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.36■□□□□ 0.53
SSX2IPQ9Y2D8 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC18.36■□□□□ 0.53
SSX2IPQ9Y2D8 AL031432.2-201ENST00000566714 459 ntBASIC18.36■□□□□ 0.53
SSX2IPQ9Y2D8 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
SSX2IPQ9Y2D8 AL928711.1-201ENST00000570165 459 ntBASIC18.36■□□□□ 0.53
SSX2IPQ9Y2D8 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.36■□□□□ 0.53
SSX2IPQ9Y2D8 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.36■□□□□ 0.53
SSX2IPQ9Y2D8 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SSX2IPQ9Y2D8 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC18.36■□□□□ 0.53
SSX2IPQ9Y2D8 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC18.36■□□□□ 0.53
SSX2IPQ9Y2D8 MED16-214ENST00000617672 554 ntTSL 5 BASIC18.36■□□□□ 0.53
SSX2IPQ9Y2D8 CITED2-204ENST00000618718 901 ntTSL 2 BASIC18.36■□□□□ 0.53
SSX2IPQ9Y2D8 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.36■□□□□ 0.53
SSX2IPQ9Y2D8 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
SSX2IPQ9Y2D8 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC18.36■□□□□ 0.53
SSX2IPQ9Y2D8 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SSX2IPQ9Y2D8 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SSX2IPQ9Y2D8 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
SSX2IPQ9Y2D8 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
SSX2IPQ9Y2D8 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SSX2IPQ9Y2D8 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.35■□□□□ 0.53
SSX2IPQ9Y2D8 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
SSX2IPQ9Y2D8 AC046185.3-201ENST00000623228 1824 ntBASIC18.35■□□□□ 0.53
SSX2IPQ9Y2D8 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.35■□□□□ 0.53
SSX2IPQ9Y2D8 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SSX2IPQ9Y2D8 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SSX2IPQ9Y2D8 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
SSX2IPQ9Y2D8 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SSX2IPQ9Y2D8 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.35■□□□□ 0.53
SSX2IPQ9Y2D8 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SSX2IPQ9Y2D8 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
SSX2IPQ9Y2D8 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
SSX2IPQ9Y2D8 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC18.35■□□□□ 0.53
SSX2IPQ9Y2D8 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SSX2IPQ9Y2D8 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
SSX2IPQ9Y2D8 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SSX2IPQ9Y2D8 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC18.35■□□□□ 0.53
SSX2IPQ9Y2D8 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC18.35■□□□□ 0.53
SSX2IPQ9Y2D8 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC18.35■□□□□ 0.53
SSX2IPQ9Y2D8 FAM185BP-201ENST00000443595 716 ntBASIC18.35■□□□□ 0.53
SSX2IPQ9Y2D8 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC18.35■□□□□ 0.53
SSX2IPQ9Y2D8 RFPL4AP1-201ENST00000530883 850 ntBASIC18.35■□□□□ 0.53
SSX2IPQ9Y2D8 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
SSX2IPQ9Y2D8 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC18.35■□□□□ 0.53
SSX2IPQ9Y2D8 METTL23-205ENST00000588302 925 ntTSL 5 BASIC18.35■□□□□ 0.53
SSX2IPQ9Y2D8 AC068137.2-201ENST00000605408 478 ntBASIC18.35■□□□□ 0.53
SSX2IPQ9Y2D8 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
SSX2IPQ9Y2D8 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC18.35■□□□□ 0.53
SSX2IPQ9Y2D8 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SSX2IPQ9Y2D8 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.35■□□□□ 0.53
SSX2IPQ9Y2D8 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
SSX2IPQ9Y2D8 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SSX2IPQ9Y2D8 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
SSX2IPQ9Y2D8 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.35■□□□□ 0.53
SSX2IPQ9Y2D8 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SSX2IPQ9Y2D8 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SSX2IPQ9Y2D8 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
SSX2IPQ9Y2D8 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SSX2IPQ9Y2D8 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SSX2IPQ9Y2D8 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
SSX2IPQ9Y2D8 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC18.34■□□□□ 0.53
SSX2IPQ9Y2D8 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SSX2IPQ9Y2D8 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC18.34■□□□□ 0.53
SSX2IPQ9Y2D8 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
SSX2IPQ9Y2D8 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
SSX2IPQ9Y2D8 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
SSX2IPQ9Y2D8 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SSX2IPQ9Y2D8 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SSX2IPQ9Y2D8 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SSX2IPQ9Y2D8 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SSX2IPQ9Y2D8 CYMP-203ENST00000474680 1263 ntBASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms