Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
PDZRN3Q9UPQ7 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
PDZRN3Q9UPQ7 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PDZRN3Q9UPQ7 CD82-202ENST00000342935 967 ntTSL 5 BASIC21.99■■□□□ 1.11
PDZRN3Q9UPQ7 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC21.99■■□□□ 1.11
PDZRN3Q9UPQ7 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
PDZRN3Q9UPQ7 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC21.99■■□□□ 1.11
PDZRN3Q9UPQ7 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC21.99■■□□□ 1.11
PDZRN3Q9UPQ7 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC21.99■■□□□ 1.11
PDZRN3Q9UPQ7 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC21.99■■□□□ 1.11
PDZRN3Q9UPQ7 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC21.99■■□□□ 1.11
PDZRN3Q9UPQ7 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC21.99■■□□□ 1.11
PDZRN3Q9UPQ7 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC21.99■■□□□ 1.11
PDZRN3Q9UPQ7 METTL23-205ENST00000588302 925 ntTSL 5 BASIC21.99■■□□□ 1.11
PDZRN3Q9UPQ7 AC010654.1-201ENST00000615722 808 ntBASIC21.99■■□□□ 1.11
PDZRN3Q9UPQ7 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC21.99■■□□□ 1.11
PDZRN3Q9UPQ7 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
PDZRN3Q9UPQ7 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
PDZRN3Q9UPQ7 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
PDZRN3Q9UPQ7 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PDZRN3Q9UPQ7 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
PDZRN3Q9UPQ7 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC21.99■■□□□ 1.11
PDZRN3Q9UPQ7 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
PDZRN3Q9UPQ7 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
PDZRN3Q9UPQ7 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC21.98■■□□□ 1.11
PDZRN3Q9UPQ7 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PDZRN3Q9UPQ7 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
PDZRN3Q9UPQ7 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PDZRN3Q9UPQ7 GPR89P-201ENST00000407924 1495 ntBASIC21.98■■□□□ 1.11
PDZRN3Q9UPQ7 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
PDZRN3Q9UPQ7 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PDZRN3Q9UPQ7 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
PDZRN3Q9UPQ7 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC21.98■■□□□ 1.11
PDZRN3Q9UPQ7 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
PDZRN3Q9UPQ7 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
PDZRN3Q9UPQ7 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC21.98■■□□□ 1.11
PDZRN3Q9UPQ7 PDPK2P-202ENST00000562415 1191 ntBASIC21.98■■□□□ 1.11
PDZRN3Q9UPQ7 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC21.98■■□□□ 1.11
PDZRN3Q9UPQ7 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PDZRN3Q9UPQ7 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC21.98■■□□□ 1.11
PDZRN3Q9UPQ7 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
PDZRN3Q9UPQ7 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PDZRN3Q9UPQ7 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PDZRN3Q9UPQ7 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
PDZRN3Q9UPQ7 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PDZRN3Q9UPQ7 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
PDZRN3Q9UPQ7 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
PDZRN3Q9UPQ7 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
PDZRN3Q9UPQ7 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC21.97■■□□□ 1.11
PDZRN3Q9UPQ7 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PDZRN3Q9UPQ7 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC21.97■■□□□ 1.11
PDZRN3Q9UPQ7 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PDZRN3Q9UPQ7 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PDZRN3Q9UPQ7 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PDZRN3Q9UPQ7 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PDZRN3Q9UPQ7 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PDZRN3Q9UPQ7 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC21.97■■□□□ 1.11
PDZRN3Q9UPQ7 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC21.97■■□□□ 1.11
PDZRN3Q9UPQ7 SIGLEC30P-201ENST00000455569 941 ntBASIC21.97■■□□□ 1.11
PDZRN3Q9UPQ7 AP000344.2-201ENST00000512987 629 ntBASIC21.97■■□□□ 1.11
PDZRN3Q9UPQ7 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PDZRN3Q9UPQ7 AC018845.2-201ENST00000568326 409 ntBASIC21.97■■□□□ 1.11
PDZRN3Q9UPQ7 CYB561-217ENST00000582997 877 ntTSL 5 BASIC21.97■■□□□ 1.11
PDZRN3Q9UPQ7 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC21.97■■□□□ 1.11
PDZRN3Q9UPQ7 AL078644.1-201ENST00000609881 752 ntBASIC21.97■■□□□ 1.11
PDZRN3Q9UPQ7 AC004790.2-201ENST00000623588 572 ntBASIC21.97■■□□□ 1.11
PDZRN3Q9UPQ7 AL805961.1-202ENST00000641562 540 ntBASIC21.97■■□□□ 1.11
PDZRN3Q9UPQ7 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PDZRN3Q9UPQ7 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PDZRN3Q9UPQ7 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PDZRN3Q9UPQ7 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PDZRN3Q9UPQ7 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
PDZRN3Q9UPQ7 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PDZRN3Q9UPQ7 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PDZRN3Q9UPQ7 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
PDZRN3Q9UPQ7 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC21.96■■□□□ 1.11
PDZRN3Q9UPQ7 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
PDZRN3Q9UPQ7 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC21.96■■□□□ 1.11
PDZRN3Q9UPQ7 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC21.96■■□□□ 1.11
PDZRN3Q9UPQ7 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
PDZRN3Q9UPQ7 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC21.96■■□□□ 1.11
PDZRN3Q9UPQ7 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PDZRN3Q9UPQ7 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
PDZRN3Q9UPQ7 AL121761.2-201ENST00000598007 1648 ntBASIC21.96■■□□□ 1.11
PDZRN3Q9UPQ7 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC21.96■■□□□ 1.11
PDZRN3Q9UPQ7 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PDZRN3Q9UPQ7 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC21.96■■□□□ 1.11
PDZRN3Q9UPQ7 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC21.96■■□□□ 1.11
PDZRN3Q9UPQ7 CIPC-205ENST00000555437 566 ntTSL 3 BASIC21.96■■□□□ 1.11
PDZRN3Q9UPQ7 AC096734.2-201ENST00000562054 433 ntBASIC21.96■■□□□ 1.11
PDZRN3Q9UPQ7 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC21.96■■□□□ 1.11
PDZRN3Q9UPQ7 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PDZRN3Q9UPQ7 GID4-202ENST00000376345 1391 ntTSL 3 BASIC21.96■■□□□ 1.11
PDZRN3Q9UPQ7 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PDZRN3Q9UPQ7 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PDZRN3Q9UPQ7 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
PDZRN3Q9UPQ7 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.11
PDZRN3Q9UPQ7 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
PDZRN3Q9UPQ7 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
PDZRN3Q9UPQ7 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC21.95■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms