Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHA4Q9UN74 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC19.47■□□□□ 0.71
PCDHA4Q9UN74 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
PCDHA4Q9UN74 RPL13AP23-201ENST00000480739 586 ntBASIC19.47■□□□□ 0.71
PCDHA4Q9UN74 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
PCDHA4Q9UN74 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC19.47■□□□□ 0.71
PCDHA4Q9UN74 AC010654.1-201ENST00000615722 808 ntBASIC19.47■□□□□ 0.71
PCDHA4Q9UN74 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC19.47■□□□□ 0.71
PCDHA4Q9UN74 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHA4Q9UN74 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC19.47■□□□□ 0.71
PCDHA4Q9UN74 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHA4Q9UN74 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHA4Q9UN74 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC19.47■□□□□ 0.71
PCDHA4Q9UN74 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHA4Q9UN74 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHA4Q9UN74 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHA4Q9UN74 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
PCDHA4Q9UN74 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHA4Q9UN74 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
PCDHA4Q9UN74 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC19.47■□□□□ 0.71
PCDHA4Q9UN74 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHA4Q9UN74 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
PCDHA4Q9UN74 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHA4Q9UN74 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
PCDHA4Q9UN74 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHA4Q9UN74 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC19.46■□□□□ 0.71
PCDHA4Q9UN74 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC19.46■□□□□ 0.71
PCDHA4Q9UN74 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHA4Q9UN74 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
PCDHA4Q9UN74 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
PCDHA4Q9UN74 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHA4Q9UN74 AC104109.2-201ENST00000602919 1418 ntBASIC19.46■□□□□ 0.71
PCDHA4Q9UN74 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC19.46■□□□□ 0.71
PCDHA4Q9UN74 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHA4Q9UN74 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHA4Q9UN74 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC19.46■□□□□ 0.71
PCDHA4Q9UN74 SLC25A1P1-201ENST00000528351 927 ntBASIC19.46■□□□□ 0.71
PCDHA4Q9UN74 AC034105.1-201ENST00000563488 319 ntBASIC19.46■□□□□ 0.71
PCDHA4Q9UN74 MIR4751-201ENST00000578027 74 ntBASIC19.46■□□□□ 0.71
PCDHA4Q9UN74 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
PCDHA4Q9UN74 AC120114.3-201ENST00000611923 658 ntBASIC19.46■□□□□ 0.71
PCDHA4Q9UN74 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHA4Q9UN74 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC19.46■□□□□ 0.71
PCDHA4Q9UN74 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHA4Q9UN74 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
PCDHA4Q9UN74 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHA4Q9UN74 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHA4Q9UN74 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC19.46■□□□□ 0.71
PCDHA4Q9UN74 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHA4Q9UN74 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
PCDHA4Q9UN74 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
PCDHA4Q9UN74 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
PCDHA4Q9UN74 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHA4Q9UN74 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHA4Q9UN74 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHA4Q9UN74 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHA4Q9UN74 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHA4Q9UN74 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHA4Q9UN74 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHA4Q9UN74 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC19.45■□□□□ 0.7
PCDHA4Q9UN74 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC19.45■□□□□ 0.7
PCDHA4Q9UN74 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHA4Q9UN74 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHA4Q9UN74 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
PCDHA4Q9UN74 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHA4Q9UN74 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHA4Q9UN74 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
PCDHA4Q9UN74 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHA4Q9UN74 METTL26-205ENST00000397666 726 ntTSL 2 BASIC19.45■□□□□ 0.7
PCDHA4Q9UN74 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
PCDHA4Q9UN74 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC19.45■□□□□ 0.7
PCDHA4Q9UN74 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC19.45■□□□□ 0.7
PCDHA4Q9UN74 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC19.45■□□□□ 0.7
PCDHA4Q9UN74 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC19.45■□□□□ 0.7
PCDHA4Q9UN74 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHA4Q9UN74 TCAP-202ENST00000578283 583 ntTSL 5 BASIC19.45■□□□□ 0.7
PCDHA4Q9UN74 CYB561-216ENST00000582297 897 ntTSL 3 BASIC19.45■□□□□ 0.7
PCDHA4Q9UN74 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC19.45■□□□□ 0.7
PCDHA4Q9UN74 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC19.45■□□□□ 0.7
PCDHA4Q9UN74 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
PCDHA4Q9UN74 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHA4Q9UN74 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC19.45■□□□□ 0.7
PCDHA4Q9UN74 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
PCDHA4Q9UN74 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
PCDHA4Q9UN74 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHA4Q9UN74 AC129492.6-201ENST00000611383 1305 ntBASIC19.45■□□□□ 0.7
PCDHA4Q9UN74 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHA4Q9UN74 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
PCDHA4Q9UN74 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHA4Q9UN74 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHA4Q9UN74 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHA4Q9UN74 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHA4Q9UN74 PCDHA12-202ENST00000613593 2588 ntBASIC19.44■□□□□ 0.7
PCDHA4Q9UN74 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHA4Q9UN74 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHA4Q9UN74 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
PCDHA4Q9UN74 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHA4Q9UN74 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHA4Q9UN74 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHA4Q9UN74 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms