Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC26.58■■□□□ 1.85
RIMBP3Q9UFD9 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
RIMBP3Q9UFD9 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC26.58■■□□□ 1.85
RIMBP3Q9UFD9 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC26.58■■□□□ 1.85
RIMBP3Q9UFD9 TSACC-208ENST00000481479 741 ntTSL 2 BASIC26.58■■□□□ 1.85
RIMBP3Q9UFD9 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC26.58■■□□□ 1.85
RIMBP3Q9UFD9 MIR3619-201ENST00000579667 83 ntBASIC26.58■■□□□ 1.85
RIMBP3Q9UFD9 CU634019.7-201ENST00000624153 1185 ntBASIC26.58■■□□□ 1.85
RIMBP3Q9UFD9 FP236241.2-201ENST00000624906 1185 ntBASIC26.58■■□□□ 1.85
RIMBP3Q9UFD9 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC26.58■■□□□ 1.85
RIMBP3Q9UFD9 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
RIMBP3Q9UFD9 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC26.58■■□□□ 1.85
RIMBP3Q9UFD9 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC26.58■■□□□ 1.85
RIMBP3Q9UFD9 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.85
RIMBP3Q9UFD9 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.85
RIMBP3Q9UFD9 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC26.58■■□□□ 1.85
RIMBP3Q9UFD9 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC26.58■■□□□ 1.85
RIMBP3Q9UFD9 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC26.58■■□□□ 1.85
RIMBP3Q9UFD9 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC26.58■■□□□ 1.84
RIMBP3Q9UFD9 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
RIMBP3Q9UFD9 AC079316.1-201ENST00000548397 411 ntBASIC26.57■■□□□ 1.84
RIMBP3Q9UFD9 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC26.57■■□□□ 1.84
RIMBP3Q9UFD9 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC26.57■■□□□ 1.84
RIMBP3Q9UFD9 RARRES2P5-201ENST00000564013 466 ntBASIC26.57■■□□□ 1.84
RIMBP3Q9UFD9 AC097724.1-201ENST00000609581 426 ntBASIC26.57■■□□□ 1.84
RIMBP3Q9UFD9 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
RIMBP3Q9UFD9 HARS-204ENST00000438307 1789 ntTSL 2 BASIC26.57■■□□□ 1.84
RIMBP3Q9UFD9 LINC01006-201ENST00000333319 2292 ntBASIC26.57■■□□□ 1.84
RIMBP3Q9UFD9 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
RIMBP3Q9UFD9 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC26.57■■□□□ 1.84
RIMBP3Q9UFD9 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC26.57■■□□□ 1.84
RIMBP3Q9UFD9 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
RIMBP3Q9UFD9 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
RIMBP3Q9UFD9 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
RIMBP3Q9UFD9 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
RIMBP3Q9UFD9 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
RIMBP3Q9UFD9 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
RIMBP3Q9UFD9 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC26.57■■□□□ 1.84
RIMBP3Q9UFD9 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
RIMBP3Q9UFD9 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC26.57■■□□□ 1.84
RIMBP3Q9UFD9 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC26.57■■□□□ 1.84
RIMBP3Q9UFD9 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
RIMBP3Q9UFD9 KRT90P-201ENST00000549264 1064 ntBASIC26.57■■□□□ 1.84
RIMBP3Q9UFD9 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC26.57■■□□□ 1.84
RIMBP3Q9UFD9 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC26.57■■□□□ 1.84
RIMBP3Q9UFD9 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC26.57■■□□□ 1.84
RIMBP3Q9UFD9 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC26.57■■□□□ 1.84
RIMBP3Q9UFD9 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC26.57■■□□□ 1.84
RIMBP3Q9UFD9 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
RIMBP3Q9UFD9 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC26.56■■□□□ 1.84
RIMBP3Q9UFD9 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
RIMBP3Q9UFD9 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
RIMBP3Q9UFD9 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
RIMBP3Q9UFD9 ZBTB12BP-201ENST00000314232 1122 ntBASIC26.56■■□□□ 1.84
RIMBP3Q9UFD9 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC26.56■■□□□ 1.84
RIMBP3Q9UFD9 KRT18P66-201ENST00000452970 1269 ntBASIC26.56■■□□□ 1.84
RIMBP3Q9UFD9 RN7SL769P-201ENST00000469386 295 ntBASIC26.56■■□□□ 1.84
RIMBP3Q9UFD9 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC26.56■■□□□ 1.84
RIMBP3Q9UFD9 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC26.56■■□□□ 1.84
RIMBP3Q9UFD9 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
RIMBP3Q9UFD9 AC244669.2-201ENST00000612320 853 ntBASIC26.56■■□□□ 1.84
RIMBP3Q9UFD9 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC26.56■■□□□ 1.84
RIMBP3Q9UFD9 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
RIMBP3Q9UFD9 AL607033.1-201ENST00000623900 1599 ntBASIC26.56■■□□□ 1.84
RIMBP3Q9UFD9 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC26.56■■□□□ 1.84
RIMBP3Q9UFD9 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC26.56■■□□□ 1.84
RIMBP3Q9UFD9 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
RIMBP3Q9UFD9 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC26.55■■□□□ 1.84
RIMBP3Q9UFD9 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC26.55■■□□□ 1.84
RIMBP3Q9UFD9 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC26.55■■□□□ 1.84
RIMBP3Q9UFD9 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC26.55■■□□□ 1.84
RIMBP3Q9UFD9 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
RIMBP3Q9UFD9 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC26.55■■□□□ 1.84
RIMBP3Q9UFD9 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC26.55■■□□□ 1.84
RIMBP3Q9UFD9 AC008267.1-201ENST00000474858 1069 ntBASIC26.55■■□□□ 1.84
RIMBP3Q9UFD9 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC26.55■■□□□ 1.84
RIMBP3Q9UFD9 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC26.55■■□□□ 1.84
RIMBP3Q9UFD9 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
RIMBP3Q9UFD9 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC26.55■■□□□ 1.84
RIMBP3Q9UFD9 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC26.55■■□□□ 1.84
RIMBP3Q9UFD9 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
RIMBP3Q9UFD9 AC073439.1-201ENST00000624121 1774 ntBASIC26.55■■□□□ 1.84
RIMBP3Q9UFD9 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
RIMBP3Q9UFD9 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC26.54■■□□□ 1.84
RIMBP3Q9UFD9 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC26.54■■□□□ 1.84
RIMBP3Q9UFD9 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC26.54■■□□□ 1.84
RIMBP3Q9UFD9 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
RIMBP3Q9UFD9 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
RIMBP3Q9UFD9 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC26.54■■□□□ 1.84
RIMBP3Q9UFD9 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC26.54■■□□□ 1.84
RIMBP3Q9UFD9 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC26.54■■□□□ 1.84
RIMBP3Q9UFD9 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
RIMBP3Q9UFD9 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC26.54■■□□□ 1.84
RIMBP3Q9UFD9 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
RIMBP3Q9UFD9 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
RIMBP3Q9UFD9 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
RIMBP3Q9UFD9 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
RIMBP3Q9UFD9 KRT8P22-201ENST00000562317 1415 ntBASIC26.54■■□□□ 1.84
RIMBP3Q9UFD9 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
RIMBP3Q9UFD9 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms