Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CXXC1Q9P0U4 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC18.13■□□□□ 0.49
CXXC1Q9P0U4 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.12■□□□□ 0.49
CXXC1Q9P0U4 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CXXC1Q9P0U4 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.12■□□□□ 0.49
CXXC1Q9P0U4 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC18.12■□□□□ 0.49
CXXC1Q9P0U4 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CXXC1Q9P0U4 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC18.12■□□□□ 0.49
CXXC1Q9P0U4 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
CXXC1Q9P0U4 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CXXC1Q9P0U4 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CXXC1Q9P0U4 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC18.12■□□□□ 0.49
CXXC1Q9P0U4 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC18.12■□□□□ 0.49
CXXC1Q9P0U4 WASH4P-201ENST00000564273 1246 ntBASIC18.12■□□□□ 0.49
CXXC1Q9P0U4 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
CXXC1Q9P0U4 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CXXC1Q9P0U4 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CXXC1Q9P0U4 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CXXC1Q9P0U4 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CXXC1Q9P0U4 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CXXC1Q9P0U4 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CXXC1Q9P0U4 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.12■□□□□ 0.49
CXXC1Q9P0U4 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CXXC1Q9P0U4 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CXXC1Q9P0U4 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CXXC1Q9P0U4 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.12■□□□□ 0.49
CXXC1Q9P0U4 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.12■□□□□ 0.49
CXXC1Q9P0U4 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CXXC1Q9P0U4 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CXXC1Q9P0U4 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
CXXC1Q9P0U4 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CXXC1Q9P0U4 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CXXC1Q9P0U4 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
CXXC1Q9P0U4 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CXXC1Q9P0U4 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CXXC1Q9P0U4 MIR658-201ENST00000385210 100 ntBASIC18.11■□□□□ 0.49
CXXC1Q9P0U4 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
CXXC1Q9P0U4 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CXXC1Q9P0U4 PP14571-201ENST00000404327 934 ntTSL 2 BASIC18.11■□□□□ 0.49
CXXC1Q9P0U4 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CXXC1Q9P0U4 AP006294.1-201ENST00000415407 339 ntBASIC18.11■□□□□ 0.49
CXXC1Q9P0U4 MTND6P24-201ENST00000440466 518 ntBASIC18.11■□□□□ 0.49
CXXC1Q9P0U4 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CXXC1Q9P0U4 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC18.11■□□□□ 0.49
CXXC1Q9P0U4 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC18.11■□□□□ 0.49
CXXC1Q9P0U4 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC18.11■□□□□ 0.49
CXXC1Q9P0U4 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC18.11■□□□□ 0.49
CXXC1Q9P0U4 CHCHD2P3-201ENST00000603038 451 ntBASIC18.11■□□□□ 0.49
CXXC1Q9P0U4 AC004790.1-201ENST00000612686 536 ntBASIC18.11■□□□□ 0.49
CXXC1Q9P0U4 MIR6805-201ENST00000615055 62 ntBASIC18.11■□□□□ 0.49
CXXC1Q9P0U4 SNX12-206ENST00000622259 661 ntTSL 5 BASIC18.11■□□□□ 0.49
CXXC1Q9P0U4 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC18.11■□□□□ 0.49
CXXC1Q9P0U4 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CXXC1Q9P0U4 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CXXC1Q9P0U4 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CXXC1Q9P0U4 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC18.11■□□□□ 0.49
CXXC1Q9P0U4 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC18.11■□□□□ 0.49
CXXC1Q9P0U4 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
CXXC1Q9P0U4 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
CXXC1Q9P0U4 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CXXC1Q9P0U4 LINC00304-203ENST00000565008 1864 ntBASIC18.11■□□□□ 0.49
CXXC1Q9P0U4 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.11■□□□□ 0.49
CXXC1Q9P0U4 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CXXC1Q9P0U4 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CXXC1Q9P0U4 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CXXC1Q9P0U4 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CXXC1Q9P0U4 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CXXC1Q9P0U4 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CXXC1Q9P0U4 LINC00896-202ENST00000609602 2128 ntBASIC18.1■□□□□ 0.49
CXXC1Q9P0U4 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
CXXC1Q9P0U4 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC18.1■□□□□ 0.49
CXXC1Q9P0U4 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CXXC1Q9P0U4 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CXXC1Q9P0U4 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC18.1■□□□□ 0.49
CXXC1Q9P0U4 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC18.1■□□□□ 0.49
CXXC1Q9P0U4 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC18.1■□□□□ 0.49
CXXC1Q9P0U4 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CXXC1Q9P0U4 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CXXC1Q9P0U4 AL035456.1-201ENST00000456064 1369 ntBASIC18.1■□□□□ 0.49
CXXC1Q9P0U4 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CXXC1Q9P0U4 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC18.1■□□□□ 0.49
CXXC1Q9P0U4 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
CXXC1Q9P0U4 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CXXC1Q9P0U4 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC18.1■□□□□ 0.49
CXXC1Q9P0U4 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CXXC1Q9P0U4 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC18.1■□□□□ 0.49
CXXC1Q9P0U4 AC135586.1-201ENST00000539323 574 ntBASIC18.1■□□□□ 0.49
CXXC1Q9P0U4 KRT17P8-201ENST00000540749 863 ntBASIC18.1■□□□□ 0.49
CXXC1Q9P0U4 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC18.1■□□□□ 0.49
CXXC1Q9P0U4 AL589739.1-201ENST00000607720 493 ntBASIC18.1■□□□□ 0.49
CXXC1Q9P0U4 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC18.1■□□□□ 0.49
CXXC1Q9P0U4 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CXXC1Q9P0U4 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CXXC1Q9P0U4 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CXXC1Q9P0U4 CETN4P-206ENST00000642099 2168 ntBASIC18.1■□□□□ 0.49
CXXC1Q9P0U4 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CXXC1Q9P0U4 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.09■□□□□ 0.49
CXXC1Q9P0U4 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC18.09■□□□□ 0.49
CXXC1Q9P0U4 AC131009.4-201ENST00000624048 1740 ntBASIC18.09■□□□□ 0.49
CXXC1Q9P0U4 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms