Protein–RNA interactions for Protein: Q9H6J7

C11orf49, UPF0705 protein C11orf49, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf49Q9H6J7 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
C11orf49Q9H6J7 AC099568.2-201ENST00000609194 695 ntBASIC18.52■□□□□ 0.56
C11orf49Q9H6J7 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC18.52■□□□□ 0.56
C11orf49Q9H6J7 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC18.52■□□□□ 0.56
C11orf49Q9H6J7 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
C11orf49Q9H6J7 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
C11orf49Q9H6J7 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
C11orf49Q9H6J7 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.52■□□□□ 0.55
C11orf49Q9H6J7 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.52■□□□□ 0.55
C11orf49Q9H6J7 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
C11orf49Q9H6J7 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
C11orf49Q9H6J7 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC18.52■□□□□ 0.55
C11orf49Q9H6J7 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
C11orf49Q9H6J7 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
C11orf49Q9H6J7 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
C11orf49Q9H6J7 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
C11orf49Q9H6J7 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC18.51■□□□□ 0.55
C11orf49Q9H6J7 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.51■□□□□ 0.55
C11orf49Q9H6J7 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC18.51■□□□□ 0.55
C11orf49Q9H6J7 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
C11orf49Q9H6J7 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.51■□□□□ 0.55
C11orf49Q9H6J7 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
C11orf49Q9H6J7 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.51■□□□□ 0.55
C11orf49Q9H6J7 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
C11orf49Q9H6J7 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
C11orf49Q9H6J7 FOXO1B-201ENST00000504678 1527 ntBASIC18.51■□□□□ 0.55
C11orf49Q9H6J7 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
C11orf49Q9H6J7 RPF1-202ENST00000370656 724 ntTSL 2 BASIC18.51■□□□□ 0.55
C11orf49Q9H6J7 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
C11orf49Q9H6J7 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
C11orf49Q9H6J7 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC18.51■□□□□ 0.55
C11orf49Q9H6J7 MPV17-208ENST00000405076 603 ntTSL 5 BASIC18.51■□□□□ 0.55
C11orf49Q9H6J7 RASL12-203ENST00000434605 982 ntTSL 2 BASIC18.51■□□□□ 0.55
C11orf49Q9H6J7 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC18.51■□□□□ 0.55
C11orf49Q9H6J7 AC234783.1-201ENST00000441761 496 ntBASIC18.51■□□□□ 0.55
C11orf49Q9H6J7 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC18.51■□□□□ 0.55
C11orf49Q9H6J7 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
C11orf49Q9H6J7 PRYP6-201ENST00000514804 343 ntBASIC18.51■□□□□ 0.55
C11orf49Q9H6J7 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC18.51■□□□□ 0.55
C11orf49Q9H6J7 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
C11orf49Q9H6J7 AP005482.1-201ENST00000563722 1273 ntBASIC18.51■□□□□ 0.55
C11orf49Q9H6J7 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
C11orf49Q9H6J7 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC18.51■□□□□ 0.55
C11orf49Q9H6J7 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
C11orf49Q9H6J7 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
C11orf49Q9H6J7 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
C11orf49Q9H6J7 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC18.51■□□□□ 0.55
C11orf49Q9H6J7 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
C11orf49Q9H6J7 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
C11orf49Q9H6J7 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
C11orf49Q9H6J7 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC18.5■□□□□ 0.55
C11orf49Q9H6J7 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
C11orf49Q9H6J7 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
C11orf49Q9H6J7 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC18.5■□□□□ 0.55
C11orf49Q9H6J7 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
C11orf49Q9H6J7 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC18.5■□□□□ 0.55
C11orf49Q9H6J7 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
C11orf49Q9H6J7 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
C11orf49Q9H6J7 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC18.5■□□□□ 0.55
C11orf49Q9H6J7 AC131009.4-201ENST00000624048 1740 ntBASIC18.5■□□□□ 0.55
C11orf49Q9H6J7 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
C11orf49Q9H6J7 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
C11orf49Q9H6J7 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC18.5■□□□□ 0.55
C11orf49Q9H6J7 CDK2AP2P3-201ENST00000422476 372 ntBASIC18.5■□□□□ 0.55
C11orf49Q9H6J7 STARD13-205ENST00000439831 945 ntTSL 2 BASIC18.5■□□□□ 0.55
C11orf49Q9H6J7 KRT223P-202ENST00000449164 1292 ntBASIC18.5■□□□□ 0.55
C11orf49Q9H6J7 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC18.5■□□□□ 0.55
C11orf49Q9H6J7 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
C11orf49Q9H6J7 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC18.5■□□□□ 0.55
C11orf49Q9H6J7 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC18.5■□□□□ 0.55
C11orf49Q9H6J7 AC105021.1-202ENST00000570572 669 ntBASIC18.5■□□□□ 0.55
C11orf49Q9H6J7 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC18.5■□□□□ 0.55
C11orf49Q9H6J7 AC004790.1-201ENST00000612686 536 ntBASIC18.5■□□□□ 0.55
C11orf49Q9H6J7 AC133552.6-201ENST00000613406 534 ntBASIC18.5■□□□□ 0.55
C11orf49Q9H6J7 SPTSSB-204ENST00000617024 1292 ntBASIC18.5■□□□□ 0.55
C11orf49Q9H6J7 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC18.5■□□□□ 0.55
C11orf49Q9H6J7 COX11-210ENST00000639671 696 ntBASIC18.5■□□□□ 0.55
C11orf49Q9H6J7 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
C11orf49Q9H6J7 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC18.5■□□□□ 0.55
C11orf49Q9H6J7 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.5■□□□□ 0.55
C11orf49Q9H6J7 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
C11orf49Q9H6J7 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
C11orf49Q9H6J7 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.5■□□□□ 0.55
C11orf49Q9H6J7 HARS-204ENST00000438307 1789 ntTSL 2 BASIC18.5■□□□□ 0.55
C11orf49Q9H6J7 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
C11orf49Q9H6J7 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
C11orf49Q9H6J7 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
C11orf49Q9H6J7 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
C11orf49Q9H6J7 FLJ13224-201ENST00000313737 1514 ntBASIC18.49■□□□□ 0.55
C11orf49Q9H6J7 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC18.49■□□□□ 0.55
C11orf49Q9H6J7 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
C11orf49Q9H6J7 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.49■□□□□ 0.55
C11orf49Q9H6J7 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.49■□□□□ 0.55
C11orf49Q9H6J7 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
C11orf49Q9H6J7 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
C11orf49Q9H6J7 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
C11orf49Q9H6J7 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC18.49■□□□□ 0.55
C11orf49Q9H6J7 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
C11orf49Q9H6J7 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC18.49■□□□□ 0.55
C11orf49Q9H6J7 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms