Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.39■□□□□ 0.21
PIF1Q9H611 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PIF1Q9H611 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PIF1Q9H611 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PIF1Q9H611 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PIF1Q9H611 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PIF1Q9H611 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC16.38■□□□□ 0.21
PIF1Q9H611 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PIF1Q9H611 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
PIF1Q9H611 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.38■□□□□ 0.21
PIF1Q9H611 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.38■□□□□ 0.21
PIF1Q9H611 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PIF1Q9H611 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PIF1Q9H611 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
PIF1Q9H611 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.38■□□□□ 0.21
PIF1Q9H611 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PIF1Q9H611 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PIF1Q9H611 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PIF1Q9H611 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PIF1Q9H611 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
PIF1Q9H611 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PIF1Q9H611 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC16.38■□□□□ 0.21
PIF1Q9H611 COX5BP2-201ENST00000392354 334 ntBASIC16.38■□□□□ 0.21
PIF1Q9H611 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PIF1Q9H611 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.38■□□□□ 0.21
PIF1Q9H611 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PIF1Q9H611 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.38■□□□□ 0.21
PIF1Q9H611 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PIF1Q9H611 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
PIF1Q9H611 GPR32P1-201ENST00000601788 811 ntBASIC16.38■□□□□ 0.21
PIF1Q9H611 AC006011.2-201ENST00000621313 1158 ntBASIC16.38■□□□□ 0.21
PIF1Q9H611 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.38■□□□□ 0.21
PIF1Q9H611 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
PIF1Q9H611 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PIF1Q9H611 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.38■□□□□ 0.21
PIF1Q9H611 PCDHB17P-201ENST00000539533 2393 ntBASIC16.38■□□□□ 0.21
PIF1Q9H611 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PIF1Q9H611 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
PIF1Q9H611 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.38■□□□□ 0.21
PIF1Q9H611 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PIF1Q9H611 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PIF1Q9H611 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.38■□□□□ 0.21
PIF1Q9H611 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PIF1Q9H611 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.38■□□□□ 0.21
PIF1Q9H611 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PIF1Q9H611 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
PIF1Q9H611 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PIF1Q9H611 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PIF1Q9H611 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PIF1Q9H611 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.37■□□□□ 0.21
PIF1Q9H611 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PIF1Q9H611 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.37■□□□□ 0.21
PIF1Q9H611 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.37■□□□□ 0.21
PIF1Q9H611 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.37■□□□□ 0.21
PIF1Q9H611 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
PIF1Q9H611 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PIF1Q9H611 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PIF1Q9H611 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PIF1Q9H611 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PIF1Q9H611 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PIF1Q9H611 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PIF1Q9H611 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.37■□□□□ 0.21
PIF1Q9H611 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
PIF1Q9H611 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PIF1Q9H611 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PIF1Q9H611 PAUPAR-201ENST00000630360 2965 ntBASIC16.37■□□□□ 0.21
PIF1Q9H611 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.37■□□□□ 0.21
PIF1Q9H611 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
PIF1Q9H611 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PIF1Q9H611 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PIF1Q9H611 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PIF1Q9H611 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PIF1Q9H611 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PIF1Q9H611 AC104076.2-201ENST00000448912 469 ntBASIC16.37■□□□□ 0.21
PIF1Q9H611 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.37■□□□□ 0.21
PIF1Q9H611 AC063952.2-201ENST00000498792 1227 ntBASIC16.37■□□□□ 0.21
PIF1Q9H611 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC16.37■□□□□ 0.21
PIF1Q9H611 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC16.37■□□□□ 0.21
PIF1Q9H611 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.37■□□□□ 0.21
PIF1Q9H611 RN7SL850P-201ENST00000579959 291 ntBASIC16.37■□□□□ 0.21
PIF1Q9H611 RBM42-202ENST00000586618 771 ntTSL 3 BASIC16.37■□□□□ 0.21
PIF1Q9H611 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PIF1Q9H611 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
PIF1Q9H611 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PIF1Q9H611 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PIF1Q9H611 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
PIF1Q9H611 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PIF1Q9H611 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PIF1Q9H611 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PIF1Q9H611 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PIF1Q9H611 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
PIF1Q9H611 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PIF1Q9H611 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PIF1Q9H611 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
PIF1Q9H611 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PIF1Q9H611 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.36■□□□□ 0.21
PIF1Q9H611 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PIF1Q9H611 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PIF1Q9H611 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.36■□□□□ 0.21
PIF1Q9H611 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms