Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RNF41Q9H4P4 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RNF41Q9H4P4 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RNF41Q9H4P4 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RNF41Q9H4P4 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
RNF41Q9H4P4 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RNF41Q9H4P4 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC20.09■□□□□ 0.81
RNF41Q9H4P4 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RNF41Q9H4P4 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RNF41Q9H4P4 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
RNF41Q9H4P4 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC20.09■□□□□ 0.81
RNF41Q9H4P4 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
RNF41Q9H4P4 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RNF41Q9H4P4 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RNF41Q9H4P4 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC20.09■□□□□ 0.81
RNF41Q9H4P4 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC20.09■□□□□ 0.81
RNF41Q9H4P4 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC20.09■□□□□ 0.81
RNF41Q9H4P4 AC096734.2-201ENST00000562054 433 ntBASIC20.09■□□□□ 0.81
RNF41Q9H4P4 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RNF41Q9H4P4 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC20.09■□□□□ 0.81
RNF41Q9H4P4 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
RNF41Q9H4P4 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
RNF41Q9H4P4 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RNF41Q9H4P4 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC20.09■□□□□ 0.81
RNF41Q9H4P4 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC20.09■□□□□ 0.81
RNF41Q9H4P4 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RNF41Q9H4P4 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RNF41Q9H4P4 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
RNF41Q9H4P4 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC20.08■□□□□ 0.81
RNF41Q9H4P4 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RNF41Q9H4P4 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RNF41Q9H4P4 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.81
RNF41Q9H4P4 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RNF41Q9H4P4 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
RNF41Q9H4P4 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC20.08■□□□□ 0.81
RNF41Q9H4P4 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
RNF41Q9H4P4 CYP51A1P2-201ENST00000419457 1499 ntBASIC20.08■□□□□ 0.81
RNF41Q9H4P4 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC20.08■□□□□ 0.81
RNF41Q9H4P4 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC20.08■□□□□ 0.81
RNF41Q9H4P4 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RNF41Q9H4P4 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC20.08■□□□□ 0.81
RNF41Q9H4P4 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC20.08■□□□□ 0.81
RNF41Q9H4P4 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC20.08■□□□□ 0.81
RNF41Q9H4P4 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC20.08■□□□□ 0.81
RNF41Q9H4P4 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC20.08■□□□□ 0.81
RNF41Q9H4P4 AC005412.3-201ENST00000580309 715 ntBASIC20.08■□□□□ 0.81
RNF41Q9H4P4 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
RNF41Q9H4P4 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
RNF41Q9H4P4 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC20.08■□□□□ 0.8
RNF41Q9H4P4 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
RNF41Q9H4P4 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RNF41Q9H4P4 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC20.08■□□□□ 0.8
RNF41Q9H4P4 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC20.07■□□□□ 0.8
RNF41Q9H4P4 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF41Q9H4P4 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF41Q9H4P4 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RNF41Q9H4P4 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF41Q9H4P4 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RNF41Q9H4P4 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
RNF41Q9H4P4 AC060834.1-201ENST00000443027 2032 ntBASIC20.07■□□□□ 0.8
RNF41Q9H4P4 AC092068.3-201ENST00000587894 2016 ntBASIC20.07■□□□□ 0.8
RNF41Q9H4P4 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF41Q9H4P4 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF41Q9H4P4 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF41Q9H4P4 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC20.07■□□□□ 0.8
RNF41Q9H4P4 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RNF41Q9H4P4 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF41Q9H4P4 AL671883.3-201ENST00000603274 991 ntBASIC20.07■□□□□ 0.8
RNF41Q9H4P4 BSG-214ENST00000614867 960 ntTSL 3 BASIC20.07■□□□□ 0.8
RNF41Q9H4P4 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RNF41Q9H4P4 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF41Q9H4P4 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF41Q9H4P4 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF41Q9H4P4 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC20.07■□□□□ 0.8
RNF41Q9H4P4 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF41Q9H4P4 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RNF41Q9H4P4 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RNF41Q9H4P4 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
RNF41Q9H4P4 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC20.07■□□□□ 0.8
RNF41Q9H4P4 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF41Q9H4P4 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
RNF41Q9H4P4 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF41Q9H4P4 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF41Q9H4P4 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC20.06■□□□□ 0.8
RNF41Q9H4P4 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF41Q9H4P4 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
RNF41Q9H4P4 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
RNF41Q9H4P4 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF41Q9H4P4 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RNF41Q9H4P4 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF41Q9H4P4 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF41Q9H4P4 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF41Q9H4P4 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC20.06■□□□□ 0.8
RNF41Q9H4P4 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF41Q9H4P4 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF41Q9H4P4 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF41Q9H4P4 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC20.06■□□□□ 0.8
RNF41Q9H4P4 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RNF41Q9H4P4 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC20.06■□□□□ 0.8
RNF41Q9H4P4 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms