Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
PHACTR1Q9C0D0 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PHACTR1Q9C0D0 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.35■□□□□ 0.37
PHACTR1Q9C0D0 AP002414.1-201ENST00000391405 1147 ntBASIC17.35■□□□□ 0.37
PHACTR1Q9C0D0 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.35■□□□□ 0.37
PHACTR1Q9C0D0 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
PHACTR1Q9C0D0 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.35■□□□□ 0.37
PHACTR1Q9C0D0 AL136038.3-201ENST00000561909 1096 ntBASIC17.35■□□□□ 0.37
PHACTR1Q9C0D0 LINC01238-205ENST00000567549 1107 ntBASIC17.35■□□□□ 0.37
PHACTR1Q9C0D0 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC17.35■□□□□ 0.37
PHACTR1Q9C0D0 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PHACTR1Q9C0D0 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.35■□□□□ 0.37
PHACTR1Q9C0D0 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.35■□□□□ 0.37
PHACTR1Q9C0D0 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PHACTR1Q9C0D0 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PHACTR1Q9C0D0 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PHACTR1Q9C0D0 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PHACTR1Q9C0D0 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
PHACTR1Q9C0D0 PMPCAP1-201ENST00000508114 1576 ntBASIC17.35■□□□□ 0.37
PHACTR1Q9C0D0 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
PHACTR1Q9C0D0 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.35■□□□□ 0.37
PHACTR1Q9C0D0 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
PHACTR1Q9C0D0 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.35■□□□□ 0.37
PHACTR1Q9C0D0 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PHACTR1Q9C0D0 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PHACTR1Q9C0D0 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.34■□□□□ 0.37
PHACTR1Q9C0D0 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
PHACTR1Q9C0D0 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PHACTR1Q9C0D0 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PHACTR1Q9C0D0 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PHACTR1Q9C0D0 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PHACTR1Q9C0D0 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PHACTR1Q9C0D0 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
PHACTR1Q9C0D0 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.34■□□□□ 0.37
PHACTR1Q9C0D0 TMPOP1-202ENST00000424642 1267 ntBASIC17.34■□□□□ 0.37
PHACTR1Q9C0D0 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.34■□□□□ 0.37
PHACTR1Q9C0D0 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PHACTR1Q9C0D0 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.34■□□□□ 0.37
PHACTR1Q9C0D0 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.34■□□□□ 0.37
PHACTR1Q9C0D0 NUS1P1-201ENST00000446295 882 ntBASIC17.34■□□□□ 0.37
PHACTR1Q9C0D0 AC104076.2-201ENST00000448912 469 ntBASIC17.34■□□□□ 0.37
PHACTR1Q9C0D0 AC022616.7-201ENST00000525383 220 ntBASIC17.34■□□□□ 0.37
PHACTR1Q9C0D0 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
PHACTR1Q9C0D0 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.34■□□□□ 0.37
PHACTR1Q9C0D0 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.34■□□□□ 0.37
PHACTR1Q9C0D0 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.34■□□□□ 0.37
PHACTR1Q9C0D0 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PHACTR1Q9C0D0 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PHACTR1Q9C0D0 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
PHACTR1Q9C0D0 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PHACTR1Q9C0D0 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC17.34■□□□□ 0.37
PHACTR1Q9C0D0 AC103702.1-201ENST00000548801 2630 ntBASIC17.34■□□□□ 0.37
PHACTR1Q9C0D0 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
PHACTR1Q9C0D0 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC17.33■□□□□ 0.37
PHACTR1Q9C0D0 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PHACTR1Q9C0D0 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
PHACTR1Q9C0D0 AC006538.1-201ENST00000567905 1585 ntBASIC17.33■□□□□ 0.37
PHACTR1Q9C0D0 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.33■□□□□ 0.37
PHACTR1Q9C0D0 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
PHACTR1Q9C0D0 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.33■□□□□ 0.36
PHACTR1Q9C0D0 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PHACTR1Q9C0D0 AL021920.2-201ENST00000624828 1351 ntBASIC17.33■□□□□ 0.36
PHACTR1Q9C0D0 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PHACTR1Q9C0D0 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PHACTR1Q9C0D0 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PHACTR1Q9C0D0 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PHACTR1Q9C0D0 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PHACTR1Q9C0D0 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PHACTR1Q9C0D0 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.33■□□□□ 0.36
PHACTR1Q9C0D0 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC17.33■□□□□ 0.36
PHACTR1Q9C0D0 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.33■□□□□ 0.36
PHACTR1Q9C0D0 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
PHACTR1Q9C0D0 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.33■□□□□ 0.36
PHACTR1Q9C0D0 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.33■□□□□ 0.36
PHACTR1Q9C0D0 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PHACTR1Q9C0D0 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.33■□□□□ 0.36
PHACTR1Q9C0D0 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
PHACTR1Q9C0D0 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PHACTR1Q9C0D0 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.33■□□□□ 0.36
PHACTR1Q9C0D0 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.36
PHACTR1Q9C0D0 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.33■□□□□ 0.36
PHACTR1Q9C0D0 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PHACTR1Q9C0D0 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
PHACTR1Q9C0D0 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
PHACTR1Q9C0D0 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
PHACTR1Q9C0D0 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PHACTR1Q9C0D0 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PHACTR1Q9C0D0 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PHACTR1Q9C0D0 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.32■□□□□ 0.36
PHACTR1Q9C0D0 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
PHACTR1Q9C0D0 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.32■□□□□ 0.36
PHACTR1Q9C0D0 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
PHACTR1Q9C0D0 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PHACTR1Q9C0D0 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PHACTR1Q9C0D0 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.32■□□□□ 0.36
PHACTR1Q9C0D0 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PHACTR1Q9C0D0 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
PHACTR1Q9C0D0 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PHACTR1Q9C0D0 ME2P1-201ENST00000426028 1970 ntBASIC17.32■□□□□ 0.36
PHACTR1Q9C0D0 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms