Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SSBP3Q9BWW4 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC14.27□□□□□ -0.12
SSBP3Q9BWW4 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SSBP3Q9BWW4 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SSBP3Q9BWW4 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SSBP3Q9BWW4 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC14.27□□□□□ -0.12
SSBP3Q9BWW4 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC14.27□□□□□ -0.12
SSBP3Q9BWW4 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
SSBP3Q9BWW4 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SSBP3Q9BWW4 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
SSBP3Q9BWW4 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC14.27□□□□□ -0.12
SSBP3Q9BWW4 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SSBP3Q9BWW4 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
SSBP3Q9BWW4 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
SSBP3Q9BWW4 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
SSBP3Q9BWW4 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
SSBP3Q9BWW4 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SSBP3Q9BWW4 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
SSBP3Q9BWW4 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SSBP3Q9BWW4 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SSBP3Q9BWW4 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
SSBP3Q9BWW4 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
SSBP3Q9BWW4 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SSBP3Q9BWW4 RPP21-221ENST00000428040 594 ntTSL 2 BASIC14.27□□□□□ -0.13
SSBP3Q9BWW4 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SSBP3Q9BWW4 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SSBP3Q9BWW4 CD63-210ENST00000550776 870 ntTSL 5 BASIC14.27□□□□□ -0.13
SSBP3Q9BWW4 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC14.27□□□□□ -0.13
SSBP3Q9BWW4 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC14.27□□□□□ -0.13
SSBP3Q9BWW4 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC14.27□□□□□ -0.13
SSBP3Q9BWW4 AC010654.1-201ENST00000615722 808 ntBASIC14.27□□□□□ -0.13
SSBP3Q9BWW4 AC004790.2-201ENST00000623588 572 ntBASIC14.27□□□□□ -0.13
SSBP3Q9BWW4 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC14.27□□□□□ -0.13
SSBP3Q9BWW4 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
SSBP3Q9BWW4 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SSBP3Q9BWW4 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC14.27□□□□□ -0.13
SSBP3Q9BWW4 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
SSBP3Q9BWW4 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SSBP3Q9BWW4 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
SSBP3Q9BWW4 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SSBP3Q9BWW4 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC14.27□□□□□ -0.13
SSBP3Q9BWW4 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SSBP3Q9BWW4 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC14.26□□□□□ -0.13
SSBP3Q9BWW4 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC14.26□□□□□ -0.13
SSBP3Q9BWW4 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
SSBP3Q9BWW4 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC14.26□□□□□ -0.13
SSBP3Q9BWW4 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SSBP3Q9BWW4 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SSBP3Q9BWW4 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SSBP3Q9BWW4 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC14.26□□□□□ -0.13
SSBP3Q9BWW4 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC14.26□□□□□ -0.13
SSBP3Q9BWW4 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SSBP3Q9BWW4 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SSBP3Q9BWW4 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SSBP3Q9BWW4 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SSBP3Q9BWW4 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
SSBP3Q9BWW4 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
SSBP3Q9BWW4 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SSBP3Q9BWW4 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SSBP3Q9BWW4 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
SSBP3Q9BWW4 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SSBP3Q9BWW4 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC14.26□□□□□ -0.13
SSBP3Q9BWW4 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
SSBP3Q9BWW4 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SSBP3Q9BWW4 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC14.26□□□□□ -0.13
SSBP3Q9BWW4 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC14.26□□□□□ -0.13
SSBP3Q9BWW4 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SSBP3Q9BWW4 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC14.26□□□□□ -0.13
SSBP3Q9BWW4 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC14.26□□□□□ -0.13
SSBP3Q9BWW4 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC14.26□□□□□ -0.13
SSBP3Q9BWW4 AC040169.1-201ENST00000565382 521 ntBASIC14.26□□□□□ -0.13
SSBP3Q9BWW4 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
SSBP3Q9BWW4 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SSBP3Q9BWW4 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SSBP3Q9BWW4 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SSBP3Q9BWW4 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SSBP3Q9BWW4 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SSBP3Q9BWW4 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SSBP3Q9BWW4 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC14.26□□□□□ -0.13
SSBP3Q9BWW4 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SSBP3Q9BWW4 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
SSBP3Q9BWW4 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SSBP3Q9BWW4 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SSBP3Q9BWW4 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
SSBP3Q9BWW4 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
SSBP3Q9BWW4 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC14.25□□□□□ -0.13
SSBP3Q9BWW4 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SSBP3Q9BWW4 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
SSBP3Q9BWW4 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC14.25□□□□□ -0.13
SSBP3Q9BWW4 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SSBP3Q9BWW4 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SSBP3Q9BWW4 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SSBP3Q9BWW4 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SSBP3Q9BWW4 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC14.25□□□□□ -0.13
SSBP3Q9BWW4 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SSBP3Q9BWW4 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SSBP3Q9BWW4 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SSBP3Q9BWW4 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC14.25□□□□□ -0.13
SSBP3Q9BWW4 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
SSBP3Q9BWW4 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms