Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
UPK3BQ9BT76 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
UPK3BQ9BT76 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
UPK3BQ9BT76 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
UPK3BQ9BT76 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
UPK3BQ9BT76 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
UPK3BQ9BT76 ZNF259P1-201ENST00000407656 1365 ntBASIC11.94□□□□□ -0.5
UPK3BQ9BT76 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC11.94□□□□□ -0.5
UPK3BQ9BT76 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
UPK3BQ9BT76 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
UPK3BQ9BT76 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
UPK3BQ9BT76 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
UPK3BQ9BT76 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
UPK3BQ9BT76 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
UPK3BQ9BT76 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
UPK3BQ9BT76 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
UPK3BQ9BT76 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
UPK3BQ9BT76 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
UPK3BQ9BT76 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
UPK3BQ9BT76 ENSA-206ENST00000361631 725 ntTSL 2 BASIC11.94□□□□□ -0.5
UPK3BQ9BT76 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
UPK3BQ9BT76 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
UPK3BQ9BT76 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
UPK3BQ9BT76 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC11.94□□□□□ -0.5
UPK3BQ9BT76 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC11.94□□□□□ -0.5
UPK3BQ9BT76 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC11.94□□□□□ -0.5
UPK3BQ9BT76 ARTN-206ENST00000472435 402 ntTSL 3 BASIC11.94□□□□□ -0.5
UPK3BQ9BT76 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC11.94□□□□□ -0.5
UPK3BQ9BT76 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC11.94□□□□□ -0.5
UPK3BQ9BT76 IGHV3-22-201ENST00000520721 359 ntBASIC11.94□□□□□ -0.5
UPK3BQ9BT76 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC11.94□□□□□ -0.5
UPK3BQ9BT76 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC11.94□□□□□ -0.5
UPK3BQ9BT76 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC11.94□□□□□ -0.5
UPK3BQ9BT76 AC106730.1-201ENST00000566722 1090 ntBASIC11.94□□□□□ -0.5
UPK3BQ9BT76 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC11.94□□□□□ -0.5
UPK3BQ9BT76 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC11.94□□□□□ -0.5
UPK3BQ9BT76 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
UPK3BQ9BT76 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC11.94□□□□□ -0.5
UPK3BQ9BT76 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
UPK3BQ9BT76 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
UPK3BQ9BT76 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC11.94□□□□□ -0.5
UPK3BQ9BT76 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
UPK3BQ9BT76 AC068587.6-202ENST00000641839 5619 ntBASIC11.94□□□□□ -0.5
UPK3BQ9BT76 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC11.94□□□□□ -0.5
UPK3BQ9BT76 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
UPK3BQ9BT76 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
UPK3BQ9BT76 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
UPK3BQ9BT76 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
UPK3BQ9BT76 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
UPK3BQ9BT76 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
UPK3BQ9BT76 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
UPK3BQ9BT76 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
UPK3BQ9BT76 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
UPK3BQ9BT76 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
UPK3BQ9BT76 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
UPK3BQ9BT76 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
UPK3BQ9BT76 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
UPK3BQ9BT76 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
UPK3BQ9BT76 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
UPK3BQ9BT76 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
UPK3BQ9BT76 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
UPK3BQ9BT76 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
UPK3BQ9BT76 AC148477.5-201ENST00000625164 1645 ntBASIC11.93□□□□□ -0.5
UPK3BQ9BT76 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
UPK3BQ9BT76 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC11.93□□□□□ -0.5
UPK3BQ9BT76 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
UPK3BQ9BT76 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC11.93□□□□□ -0.5
UPK3BQ9BT76 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
UPK3BQ9BT76 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
UPK3BQ9BT76 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC11.93□□□□□ -0.5
UPK3BQ9BT76 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC11.93□□□□□ -0.5
UPK3BQ9BT76 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC11.93□□□□□ -0.5
UPK3BQ9BT76 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC11.93□□□□□ -0.5
UPK3BQ9BT76 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC11.93□□□□□ -0.5
UPK3BQ9BT76 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC11.93□□□□□ -0.5
UPK3BQ9BT76 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
UPK3BQ9BT76 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
UPK3BQ9BT76 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
UPK3BQ9BT76 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
UPK3BQ9BT76 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
UPK3BQ9BT76 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
UPK3BQ9BT76 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
UPK3BQ9BT76 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
UPK3BQ9BT76 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC11.93□□□□□ -0.5
UPK3BQ9BT76 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
UPK3BQ9BT76 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC11.93□□□□□ -0.5
UPK3BQ9BT76 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
UPK3BQ9BT76 AC136632.2-201ENST00000512891 861 ntBASIC11.93□□□□□ -0.5
UPK3BQ9BT76 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC11.93□□□□□ -0.5
UPK3BQ9BT76 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC11.93□□□□□ -0.5
UPK3BQ9BT76 SDCCAG3P1-201ENST00000589292 1150 ntBASIC11.93□□□□□ -0.5
UPK3BQ9BT76 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC11.93□□□□□ -0.5
UPK3BQ9BT76 AC004706.3-202ENST00000621574 984 ntBASIC11.93□□□□□ -0.5
UPK3BQ9BT76 AC005593.1-201ENST00000624894 515 ntBASIC11.93□□□□□ -0.5
UPK3BQ9BT76 CAND2-206ENST00000626378 333 ntTSL 5 BASIC11.93□□□□□ -0.5
UPK3BQ9BT76 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
UPK3BQ9BT76 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
UPK3BQ9BT76 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
UPK3BQ9BT76 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC11.93□□□□□ -0.5
UPK3BQ9BT76 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms