Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
VRK1Q99986 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC15.16■□□□□ 0.02
VRK1Q99986 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
VRK1Q99986 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
VRK1Q99986 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
VRK1Q99986 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
VRK1Q99986 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
VRK1Q99986 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
VRK1Q99986 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC15.16■□□□□ 0.02
VRK1Q99986 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC15.16■□□□□ 0.02
VRK1Q99986 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC15.16■□□□□ 0.02
VRK1Q99986 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
VRK1Q99986 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
VRK1Q99986 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
VRK1Q99986 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC15.16■□□□□ 0.02
VRK1Q99986 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
VRK1Q99986 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
VRK1Q99986 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VRK1Q99986 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
VRK1Q99986 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VRK1Q99986 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.15■□□□□ 0.02
VRK1Q99986 AC006116.8-202ENST00000587620 1550 ntBASIC15.15■□□□□ 0.02
VRK1Q99986 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC15.15■□□□□ 0.02
VRK1Q99986 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
VRK1Q99986 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
VRK1Q99986 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VRK1Q99986 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC15.15■□□□□ 0.02
VRK1Q99986 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VRK1Q99986 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VRK1Q99986 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
VRK1Q99986 AC093010.1-201ENST00000473625 1624 ntBASIC15.15■□□□□ 0.02
VRK1Q99986 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VRK1Q99986 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VRK1Q99986 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VRK1Q99986 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC15.15■□□□□ 0.02
VRK1Q99986 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VRK1Q99986 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VRK1Q99986 MED22-202ENST00000371999 987 ntTSL 3 BASIC15.15■□□□□ 0.02
VRK1Q99986 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
VRK1Q99986 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
VRK1Q99986 KRT18P67-201ENST00000432816 1264 ntBASIC15.15■□□□□ 0.02
VRK1Q99986 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC15.15■□□□□ 0.02
VRK1Q99986 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC15.15■□□□□ 0.02
VRK1Q99986 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC15.15■□□□□ 0.02
VRK1Q99986 AP001269.4-201ENST00000609611 512 ntBASIC15.15■□□□□ 0.02
VRK1Q99986 AC120114.3-201ENST00000611923 658 ntBASIC15.15■□□□□ 0.02
VRK1Q99986 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC15.15■□□□□ 0.02
VRK1Q99986 ABBA01031661.1-201ENST00000634362 1253 ntBASIC15.15■□□□□ 0.02
VRK1Q99986 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC15.15■□□□□ 0.02
VRK1Q99986 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
VRK1Q99986 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
VRK1Q99986 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
VRK1Q99986 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
VRK1Q99986 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
VRK1Q99986 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
VRK1Q99986 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC15.15■□□□□ 0.02
VRK1Q99986 HLA-A-201ENST00000376802 1334 ntBASIC15.15■□□□□ 0.02
VRK1Q99986 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VRK1Q99986 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
VRK1Q99986 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC15.15■□□□□ 0.02
VRK1Q99986 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
VRK1Q99986 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VRK1Q99986 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
VRK1Q99986 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
VRK1Q99986 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
VRK1Q99986 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.14■□□□□ 0.01
VRK1Q99986 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC15.14■□□□□ 0.01
VRK1Q99986 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
VRK1Q99986 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
VRK1Q99986 PAN3-AS1-201ENST00000563843 1351 ntBASIC15.14■□□□□ 0.01
VRK1Q99986 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
VRK1Q99986 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
VRK1Q99986 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
VRK1Q99986 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
VRK1Q99986 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC15.14■□□□□ 0.01
VRK1Q99986 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC15.14■□□□□ 0.01
VRK1Q99986 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC15.14■□□□□ 0.01
VRK1Q99986 SP100-208ENST00000427101 1922 ntTSL 2 BASIC15.14■□□□□ 0.01
VRK1Q99986 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
VRK1Q99986 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC15.14■□□□□ 0.01
VRK1Q99986 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
VRK1Q99986 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
VRK1Q99986 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.14■□□□□ 0.01
VRK1Q99986 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
VRK1Q99986 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
VRK1Q99986 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC15.14■□□□□ 0.01
VRK1Q99986 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
VRK1Q99986 FAM220CP-201ENST00000395253 831 ntBASIC15.14■□□□□ 0.01
VRK1Q99986 AL590627.1-203ENST00000421194 1026 ntBASIC15.14■□□□□ 0.01
VRK1Q99986 ABCD1P5-201ENST00000445663 754 ntBASIC15.14■□□□□ 0.01
VRK1Q99986 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC15.14■□□□□ 0.01
VRK1Q99986 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
VRK1Q99986 COX5A-202ENST00000562233 441 ntTSL 3 BASIC15.14■□□□□ 0.01
VRK1Q99986 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC15.14■□□□□ 0.01
VRK1Q99986 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC15.14■□□□□ 0.01
VRK1Q99986 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
VRK1Q99986 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
VRK1Q99986 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
VRK1Q99986 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
VRK1Q99986 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms