Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
NPAS1Q99742 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.59■□□□□ 0.09
NPAS1Q99742 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
NPAS1Q99742 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
NPAS1Q99742 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NPAS1Q99742 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC15.59■□□□□ 0.09
NPAS1Q99742 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
NPAS1Q99742 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC15.59■□□□□ 0.09
NPAS1Q99742 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
NPAS1Q99742 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
NPAS1Q99742 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
NPAS1Q99742 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.59■□□□□ 0.09
NPAS1Q99742 AC092910.1-201ENST00000482027 1129 ntBASIC15.59■□□□□ 0.09
NPAS1Q99742 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC15.59■□□□□ 0.09
NPAS1Q99742 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC15.59■□□□□ 0.09
NPAS1Q99742 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
NPAS1Q99742 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC15.59■□□□□ 0.09
NPAS1Q99742 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC15.59■□□□□ 0.09
NPAS1Q99742 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NPAS1Q99742 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NPAS1Q99742 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
NPAS1Q99742 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
NPAS1Q99742 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
NPAS1Q99742 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NPAS1Q99742 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
NPAS1Q99742 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
NPAS1Q99742 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
NPAS1Q99742 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
NPAS1Q99742 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
NPAS1Q99742 AC068418.2-201ENST00000577309 3703 ntBASIC15.58■□□□□ 0.09
NPAS1Q99742 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC15.58■□□□□ 0.09
NPAS1Q99742 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
NPAS1Q99742 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
NPAS1Q99742 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
NPAS1Q99742 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
NPAS1Q99742 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
NPAS1Q99742 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
NPAS1Q99742 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC15.58■□□□□ 0.08
NPAS1Q99742 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.58■□□□□ 0.08
NPAS1Q99742 PTCHD3P3-201ENST00000403073 906 ntBASIC15.58■□□□□ 0.08
NPAS1Q99742 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC15.58■□□□□ 0.08
NPAS1Q99742 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC15.58■□□□□ 0.08
NPAS1Q99742 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC15.58■□□□□ 0.08
NPAS1Q99742 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
NPAS1Q99742 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC15.58■□□□□ 0.08
NPAS1Q99742 ARTN-206ENST00000472435 402 ntTSL 3 BASIC15.58■□□□□ 0.08
NPAS1Q99742 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
NPAS1Q99742 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC15.58■□□□□ 0.08
NPAS1Q99742 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC15.58■□□□□ 0.08
NPAS1Q99742 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC15.58■□□□□ 0.08
NPAS1Q99742 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC15.58■□□□□ 0.08
NPAS1Q99742 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC15.58■□□□□ 0.08
NPAS1Q99742 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC15.58■□□□□ 0.08
NPAS1Q99742 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC15.58■□□□□ 0.08
NPAS1Q99742 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC15.58■□□□□ 0.08
NPAS1Q99742 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
NPAS1Q99742 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC15.58■□□□□ 0.08
NPAS1Q99742 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC15.58■□□□□ 0.08
NPAS1Q99742 AC117500.6-201ENST00000624871 588 ntBASIC15.58■□□□□ 0.08
NPAS1Q99742 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
NPAS1Q99742 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
NPAS1Q99742 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC15.58■□□□□ 0.08
NPAS1Q99742 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
NPAS1Q99742 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
NPAS1Q99742 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
NPAS1Q99742 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
NPAS1Q99742 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
NPAS1Q99742 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC15.58■□□□□ 0.08
NPAS1Q99742 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
NPAS1Q99742 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
NPAS1Q99742 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
NPAS1Q99742 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC15.57■□□□□ 0.08
NPAS1Q99742 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.57■□□□□ 0.08
NPAS1Q99742 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
NPAS1Q99742 LINC02012-201ENST00000608206 1725 ntBASIC15.57■□□□□ 0.08
NPAS1Q99742 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.57■□□□□ 0.08
NPAS1Q99742 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
NPAS1Q99742 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
NPAS1Q99742 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NPAS1Q99742 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
NPAS1Q99742 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC15.57■□□□□ 0.08
NPAS1Q99742 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NPAS1Q99742 AC092068.3-201ENST00000587894 2016 ntBASIC15.57■□□□□ 0.08
NPAS1Q99742 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC15.57■□□□□ 0.08
NPAS1Q99742 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.57■□□□□ 0.08
NPAS1Q99742 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
NPAS1Q99742 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.57■□□□□ 0.08
NPAS1Q99742 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
NPAS1Q99742 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
NPAS1Q99742 PENK-208ENST00000523051 772 ntTSL 5 BASIC15.57■□□□□ 0.08
NPAS1Q99742 AL662844.1-201ENST00000546340 181 ntBASIC15.57■□□□□ 0.08
NPAS1Q99742 AC105339.3-201ENST00000560043 636 ntBASIC15.57■□□□□ 0.08
NPAS1Q99742 LITAF-211ENST00000572255 516 ntTSL 4 BASIC15.57■□□□□ 0.08
NPAS1Q99742 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
NPAS1Q99742 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC15.57■□□□□ 0.08
NPAS1Q99742 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC15.57■□□□□ 0.08
NPAS1Q99742 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
NPAS1Q99742 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC15.57■□□□□ 0.08
NPAS1Q99742 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
NPAS1Q99742 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms