Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 CALR4P-201ENST00000431943 946 ntBASIC14.73□□□□□ -0.05
COL12A1Q99715 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC14.73□□□□□ -0.05
COL12A1Q99715 USP32P1-208ENST00000506594 1164 ntBASIC14.73□□□□□ -0.05
COL12A1Q99715 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.73□□□□□ -0.05
COL12A1Q99715 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC14.73□□□□□ -0.05
COL12A1Q99715 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC14.73□□□□□ -0.05
COL12A1Q99715 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC14.73□□□□□ -0.05
COL12A1Q99715 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
COL12A1Q99715 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC14.73□□□□□ -0.05
COL12A1Q99715 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
COL12A1Q99715 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC14.73□□□□□ -0.05
COL12A1Q99715 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
COL12A1Q99715 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC14.73□□□□□ -0.05
COL12A1Q99715 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
COL12A1Q99715 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC14.73□□□□□ -0.05
COL12A1Q99715 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC14.73□□□□□ -0.05
COL12A1Q99715 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
COL12A1Q99715 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
COL12A1Q99715 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC14.73□□□□□ -0.05
COL12A1Q99715 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC14.73□□□□□ -0.05
COL12A1Q99715 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC14.73□□□□□ -0.05
COL12A1Q99715 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
COL12A1Q99715 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
COL12A1Q99715 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC14.73□□□□□ -0.05
COL12A1Q99715 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC14.73□□□□□ -0.05
COL12A1Q99715 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC14.73□□□□□ -0.05
COL12A1Q99715 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
COL12A1Q99715 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
COL12A1Q99715 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC14.73□□□□□ -0.05
COL12A1Q99715 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
COL12A1Q99715 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
COL12A1Q99715 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC14.72□□□□□ -0.05
COL12A1Q99715 KRT8P13-201ENST00000463294 1010 ntBASIC14.72□□□□□ -0.05
COL12A1Q99715 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
COL12A1Q99715 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
COL12A1Q99715 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC14.72□□□□□ -0.05
COL12A1Q99715 AC015936.2-201ENST00000593177 259 ntBASIC14.72□□□□□ -0.05
COL12A1Q99715 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
COL12A1Q99715 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
COL12A1Q99715 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
COL12A1Q99715 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
COL12A1Q99715 EFTUD1P1-204ENST00000560401 1798 ntBASIC14.72□□□□□ -0.05
COL12A1Q99715 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
COL12A1Q99715 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
COL12A1Q99715 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC14.72□□□□□ -0.05
COL12A1Q99715 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
COL12A1Q99715 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
COL12A1Q99715 ENSA-206ENST00000361631 725 ntTSL 2 BASIC14.72□□□□□ -0.05
COL12A1Q99715 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
COL12A1Q99715 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC14.72□□□□□ -0.05
COL12A1Q99715 AC108725.1-201ENST00000495472 409 ntBASIC14.72□□□□□ -0.05
COL12A1Q99715 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC14.72□□□□□ -0.05
COL12A1Q99715 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.72□□□□□ -0.05
COL12A1Q99715 AC133552.6-201ENST00000613406 534 ntBASIC14.72□□□□□ -0.05
COL12A1Q99715 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
COL12A1Q99715 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
COL12A1Q99715 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
COL12A1Q99715 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
COL12A1Q99715 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
COL12A1Q99715 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC14.72□□□□□ -0.05
COL12A1Q99715 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC14.72□□□□□ -0.05
COL12A1Q99715 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC14.72□□□□□ -0.05
COL12A1Q99715 AC105129.2-201ENST00000559536 390 ntBASIC14.72□□□□□ -0.05
COL12A1Q99715 C2orf69P2-201ENST00000562032 1123 ntBASIC14.72□□□□□ -0.05
COL12A1Q99715 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
COL12A1Q99715 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
COL12A1Q99715 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC14.72□□□□□ -0.05
COL12A1Q99715 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
COL12A1Q99715 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC14.71□□□□□ -0.05
COL12A1Q99715 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
COL12A1Q99715 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
COL12A1Q99715 AC046185.3-201ENST00000623228 1824 ntBASIC14.71□□□□□ -0.05
COL12A1Q99715 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
COL12A1Q99715 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC14.71□□□□□ -0.05
COL12A1Q99715 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
COL12A1Q99715 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
COL12A1Q99715 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC14.71□□□□□ -0.05
COL12A1Q99715 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC14.71□□□□□ -0.05
COL12A1Q99715 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
COL12A1Q99715 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
COL12A1Q99715 LBH-202ENST00000401506 485 ntTSL 3 BASIC14.71□□□□□ -0.05
COL12A1Q99715 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC14.71□□□□□ -0.05
COL12A1Q99715 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC14.71□□□□□ -0.05
COL12A1Q99715 AC093004.1-201ENST00000508850 424 ntBASIC14.71□□□□□ -0.05
COL12A1Q99715 AC023310.3-201ENST00000557027 670 ntBASIC14.71□□□□□ -0.05
COL12A1Q99715 AC100756.1-201ENST00000562736 682 ntBASIC14.71□□□□□ -0.05
COL12A1Q99715 AC138749.3-201ENST00000567691 622 ntBASIC14.71□□□□□ -0.05
COL12A1Q99715 MIR3909-201ENST00000579518 119 ntBASIC14.71□□□□□ -0.05
COL12A1Q99715 AC116165.1-201ENST00000611806 668 ntBASIC14.71□□□□□ -0.05
COL12A1Q99715 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC14.71□□□□□ -0.05
COL12A1Q99715 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
COL12A1Q99715 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
COL12A1Q99715 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC14.71□□□□□ -0.05
COL12A1Q99715 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
COL12A1Q99715 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
COL12A1Q99715 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
COL12A1Q99715 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
COL12A1Q99715 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
COL12A1Q99715 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
COL12A1Q99715 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms