Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDCA3Q99618 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CDCA3Q99618 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.58■□□□□ 0.41
CDCA3Q99618 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
CDCA3Q99618 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CDCA3Q99618 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.58■□□□□ 0.41
CDCA3Q99618 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CDCA3Q99618 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
CDCA3Q99618 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.58■□□□□ 0.41
CDCA3Q99618 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.58■□□□□ 0.41
CDCA3Q99618 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.41
CDCA3Q99618 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
CDCA3Q99618 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDCA3Q99618 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDCA3Q99618 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.58■□□□□ 0.4
CDCA3Q99618 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.58■□□□□ 0.4
CDCA3Q99618 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDCA3Q99618 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC17.58■□□□□ 0.4
CDCA3Q99618 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC17.58■□□□□ 0.4
CDCA3Q99618 TMPRSS11CP-201ENST00000453277 683 ntBASIC17.58■□□□□ 0.4
CDCA3Q99618 PRYP6-201ENST00000514804 343 ntBASIC17.58■□□□□ 0.4
CDCA3Q99618 STOM-203ENST00000538954 1257 ntTSL 5 BASIC17.58■□□□□ 0.4
CDCA3Q99618 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC17.58■□□□□ 0.4
CDCA3Q99618 LITAF-210ENST00000571976 548 ntTSL 2 BASIC17.58■□□□□ 0.4
CDCA3Q99618 LITAF-214ENST00000574703 486 ntTSL 2 BASIC17.58■□□□□ 0.4
CDCA3Q99618 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CDCA3Q99618 AL132655.2-201ENST00000596276 594 ntBASIC17.58■□□□□ 0.4
CDCA3Q99618 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
CDCA3Q99618 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDCA3Q99618 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.58■□□□□ 0.4
CDCA3Q99618 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDCA3Q99618 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
CDCA3Q99618 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.58■□□□□ 0.4
CDCA3Q99618 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC17.58■□□□□ 0.4
CDCA3Q99618 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDCA3Q99618 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.58■□□□□ 0.4
CDCA3Q99618 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
CDCA3Q99618 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CDCA3Q99618 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CDCA3Q99618 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
CDCA3Q99618 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDCA3Q99618 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDCA3Q99618 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CDCA3Q99618 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC17.57■□□□□ 0.4
CDCA3Q99618 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDCA3Q99618 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.57■□□□□ 0.4
CDCA3Q99618 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.57■□□□□ 0.4
CDCA3Q99618 AC007541.1-201ENST00000570282 1469 ntBASIC17.57■□□□□ 0.4
CDCA3Q99618 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
CDCA3Q99618 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDCA3Q99618 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CDCA3Q99618 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CDCA3Q99618 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDCA3Q99618 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDCA3Q99618 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC17.57■□□□□ 0.4
CDCA3Q99618 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.57■□□□□ 0.4
CDCA3Q99618 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CDCA3Q99618 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.57■□□□□ 0.4
CDCA3Q99618 FAM220BP-201ENST00000377689 816 ntBASIC17.57■□□□□ 0.4
CDCA3Q99618 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDCA3Q99618 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC17.57■□□□□ 0.4
CDCA3Q99618 U91328.1-201ENST00000437528 223 ntBASIC17.57■□□□□ 0.4
CDCA3Q99618 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC17.57■□□□□ 0.4
CDCA3Q99618 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC17.57■□□□□ 0.4
CDCA3Q99618 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDCA3Q99618 AC009407.1-201ENST00000568958 598 ntBASIC17.57■□□□□ 0.4
CDCA3Q99618 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC17.57■□□□□ 0.4
CDCA3Q99618 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC17.57■□□□□ 0.4
CDCA3Q99618 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.57■□□□□ 0.4
CDCA3Q99618 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDCA3Q99618 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDCA3Q99618 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDCA3Q99618 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CDCA3Q99618 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.57■□□□□ 0.4
CDCA3Q99618 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDCA3Q99618 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDCA3Q99618 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.57■□□□□ 0.4
CDCA3Q99618 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CDCA3Q99618 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDCA3Q99618 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC17.57■□□□□ 0.4
CDCA3Q99618 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CDCA3Q99618 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDCA3Q99618 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CDCA3Q99618 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CDCA3Q99618 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.57■□□□□ 0.4
CDCA3Q99618 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CDCA3Q99618 AC138969.3-201ENST00000546612 1459 ntBASIC17.56■□□□□ 0.4
CDCA3Q99618 AC138932.2-201ENST00000548268 1459 ntBASIC17.56■□□□□ 0.4
CDCA3Q99618 AC126755.4-201ENST00000549796 1459 ntBASIC17.56■□□□□ 0.4
CDCA3Q99618 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
CDCA3Q99618 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC17.56■□□□□ 0.4
CDCA3Q99618 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDCA3Q99618 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CDCA3Q99618 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CDCA3Q99618 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDCA3Q99618 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDCA3Q99618 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.56■□□□□ 0.4
CDCA3Q99618 AC093503.3-201ENST00000624917 2352 ntBASIC17.56■□□□□ 0.4
CDCA3Q99618 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDCA3Q99618 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms