Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.63■□□□□ 0.25
PKP4Q99569 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PKP4Q99569 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PKP4Q99569 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PKP4Q99569 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PKP4Q99569 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.63■□□□□ 0.25
PKP4Q99569 AP002414.3-201ENST00000589352 1468 ntBASIC16.63■□□□□ 0.25
PKP4Q99569 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PKP4Q99569 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PKP4Q99569 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.63■□□□□ 0.25
PKP4Q99569 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.63■□□□□ 0.25
PKP4Q99569 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PKP4Q99569 INIP-202ENST00000374236 874 ntTSL 2 BASIC16.63■□□□□ 0.25
PKP4Q99569 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PKP4Q99569 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.63■□□□□ 0.25
PKP4Q99569 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.63■□□□□ 0.25
PKP4Q99569 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.63■□□□□ 0.25
PKP4Q99569 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.63■□□□□ 0.25
PKP4Q99569 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.63■□□□□ 0.25
PKP4Q99569 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC16.63■□□□□ 0.25
PKP4Q99569 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.63■□□□□ 0.25
PKP4Q99569 SLC25A6P4-201ENST00000586535 553 ntBASIC16.63■□□□□ 0.25
PKP4Q99569 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.63■□□□□ 0.25
PKP4Q99569 TERC-201ENST00000602385 541 ntBASIC16.63■□□□□ 0.25
PKP4Q99569 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
PKP4Q99569 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PKP4Q99569 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PKP4Q99569 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.63■□□□□ 0.25
PKP4Q99569 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
PKP4Q99569 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PKP4Q99569 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PKP4Q99569 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
PKP4Q99569 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PKP4Q99569 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.63■□□□□ 0.25
PKP4Q99569 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.63■□□□□ 0.25
PKP4Q99569 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PKP4Q99569 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PKP4Q99569 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PKP4Q99569 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.63■□□□□ 0.25
PKP4Q99569 AL121761.2-201ENST00000598007 1648 ntBASIC16.63■□□□□ 0.25
PKP4Q99569 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.63■□□□□ 0.25
PKP4Q99569 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PKP4Q99569 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PKP4Q99569 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PKP4Q99569 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.62■□□□□ 0.25
PKP4Q99569 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PKP4Q99569 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PKP4Q99569 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PKP4Q99569 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PKP4Q99569 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.62■□□□□ 0.25
PKP4Q99569 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PKP4Q99569 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.62■□□□□ 0.25
PKP4Q99569 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PKP4Q99569 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PKP4Q99569 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.62■□□□□ 0.25
PKP4Q99569 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PKP4Q99569 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PKP4Q99569 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PKP4Q99569 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PKP4Q99569 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.62■□□□□ 0.25
PKP4Q99569 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.62■□□□□ 0.25
PKP4Q99569 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PKP4Q99569 AC136632.2-201ENST00000512891 861 ntBASIC16.62■□□□□ 0.25
PKP4Q99569 RNA5SP419-201ENST00000515908 135 ntBASIC16.62■□□□□ 0.25
PKP4Q99569 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.62■□□□□ 0.25
PKP4Q99569 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PKP4Q99569 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.62■□□□□ 0.25
PKP4Q99569 MIR7706-201ENST00000613747 67 ntBASIC16.62■□□□□ 0.25
PKP4Q99569 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PKP4Q99569 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PKP4Q99569 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PKP4Q99569 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PKP4Q99569 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.62■□□□□ 0.25
PKP4Q99569 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
PKP4Q99569 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC16.62■□□□□ 0.25
PKP4Q99569 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
PKP4Q99569 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
PKP4Q99569 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PKP4Q99569 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.62■□□□□ 0.25
PKP4Q99569 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.62■□□□□ 0.25
PKP4Q99569 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.62■□□□□ 0.25
PKP4Q99569 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PKP4Q99569 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.61■□□□□ 0.25
PKP4Q99569 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PKP4Q99569 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PKP4Q99569 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PKP4Q99569 AD000864.1-201ENST00000624076 2295 ntBASIC16.61■□□□□ 0.25
PKP4Q99569 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
PKP4Q99569 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PKP4Q99569 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PKP4Q99569 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.61■□□□□ 0.25
PKP4Q99569 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PKP4Q99569 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.61■□□□□ 0.25
PKP4Q99569 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.61■□□□□ 0.25
PKP4Q99569 RPS15P9-201ENST00000494093 319 ntBASIC16.61■□□□□ 0.25
PKP4Q99569 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.61■□□□□ 0.25
PKP4Q99569 CBFB-203ENST00000561924 584 ntTSL 5 BASIC16.61■□□□□ 0.25
PKP4Q99569 AL356488.2-201ENST00000602755 427 ntBASIC16.61■□□□□ 0.25
PKP4Q99569 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
PKP4Q99569 AL805961.1-202ENST00000641562 540 ntBASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms