Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDK5RAP1Q96SZ6 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CDK5RAP1Q96SZ6 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDK5RAP1Q96SZ6 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.67■□□□□ 0.42
CDK5RAP1Q96SZ6 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CDK5RAP1Q96SZ6 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.67■□□□□ 0.42
CDK5RAP1Q96SZ6 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDK5RAP1Q96SZ6 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.67■□□□□ 0.42
CDK5RAP1Q96SZ6 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CDK5RAP1Q96SZ6 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.67■□□□□ 0.42
CDK5RAP1Q96SZ6 KRT8P49-201ENST00000604166 1432 ntBASIC17.67■□□□□ 0.42
CDK5RAP1Q96SZ6 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDK5RAP1Q96SZ6 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDK5RAP1Q96SZ6 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CDK5RAP1Q96SZ6 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.67■□□□□ 0.42
CDK5RAP1Q96SZ6 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CDK5RAP1Q96SZ6 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CDK5RAP1Q96SZ6 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.67■□□□□ 0.42
CDK5RAP1Q96SZ6 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17.67■□□□□ 0.42
CDK5RAP1Q96SZ6 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.67■□□□□ 0.42
CDK5RAP1Q96SZ6 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.67■□□□□ 0.42
CDK5RAP1Q96SZ6 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.67■□□□□ 0.42
CDK5RAP1Q96SZ6 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC17.67■□□□□ 0.42
CDK5RAP1Q96SZ6 AC005829.1-201ENST00000570002 483 ntBASIC17.67■□□□□ 0.42
CDK5RAP1Q96SZ6 AC068137.2-201ENST00000605408 478 ntBASIC17.67■□□□□ 0.42
CDK5RAP1Q96SZ6 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.67■□□□□ 0.42
CDK5RAP1Q96SZ6 AP001350.2-201ENST00000625104 1094 ntBASIC17.67■□□□□ 0.42
CDK5RAP1Q96SZ6 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.67■□□□□ 0.42
CDK5RAP1Q96SZ6 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CDK5RAP1Q96SZ6 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.67■□□□□ 0.42
CDK5RAP1Q96SZ6 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.67■□□□□ 0.42
CDK5RAP1Q96SZ6 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDK5RAP1Q96SZ6 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDK5RAP1Q96SZ6 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDK5RAP1Q96SZ6 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CDK5RAP1Q96SZ6 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDK5RAP1Q96SZ6 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CDK5RAP1Q96SZ6 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDK5RAP1Q96SZ6 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDK5RAP1Q96SZ6 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.66■□□□□ 0.42
CDK5RAP1Q96SZ6 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.66■□□□□ 0.42
CDK5RAP1Q96SZ6 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDK5RAP1Q96SZ6 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.66■□□□□ 0.42
CDK5RAP1Q96SZ6 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDK5RAP1Q96SZ6 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDK5RAP1Q96SZ6 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.66■□□□□ 0.42
CDK5RAP1Q96SZ6 ACTG1P14-201ENST00000446382 1122 ntBASIC17.66■□□□□ 0.42
CDK5RAP1Q96SZ6 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.66■□□□□ 0.42
CDK5RAP1Q96SZ6 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.66■□□□□ 0.42
CDK5RAP1Q96SZ6 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.66■□□□□ 0.42
CDK5RAP1Q96SZ6 AC139530.3-201ENST00000620344 690 ntBASIC17.66■□□□□ 0.42
CDK5RAP1Q96SZ6 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDK5RAP1Q96SZ6 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CDK5RAP1Q96SZ6 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDK5RAP1Q96SZ6 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDK5RAP1Q96SZ6 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDK5RAP1Q96SZ6 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CDK5RAP1Q96SZ6 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CDK5RAP1Q96SZ6 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDK5RAP1Q96SZ6 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CDK5RAP1Q96SZ6 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDK5RAP1Q96SZ6 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDK5RAP1Q96SZ6 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDK5RAP1Q96SZ6 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CDK5RAP1Q96SZ6 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.65■□□□□ 0.42
CDK5RAP1Q96SZ6 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDK5RAP1Q96SZ6 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDK5RAP1Q96SZ6 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.65■□□□□ 0.42
CDK5RAP1Q96SZ6 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDK5RAP1Q96SZ6 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDK5RAP1Q96SZ6 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDK5RAP1Q96SZ6 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDK5RAP1Q96SZ6 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
CDK5RAP1Q96SZ6 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.65■□□□□ 0.42
CDK5RAP1Q96SZ6 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.65■□□□□ 0.42
CDK5RAP1Q96SZ6 AC112482.1-201ENST00000492080 688 ntBASIC17.65■□□□□ 0.42
CDK5RAP1Q96SZ6 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.65■□□□□ 0.42
CDK5RAP1Q96SZ6 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
CDK5RAP1Q96SZ6 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.65■□□□□ 0.42
CDK5RAP1Q96SZ6 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC17.65■□□□□ 0.42
CDK5RAP1Q96SZ6 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CDK5RAP1Q96SZ6 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.65■□□□□ 0.42
CDK5RAP1Q96SZ6 AC079781.4-201ENST00000641908 219 ntBASIC17.65■□□□□ 0.42
CDK5RAP1Q96SZ6 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.65■□□□□ 0.42
CDK5RAP1Q96SZ6 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CDK5RAP1Q96SZ6 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDK5RAP1Q96SZ6 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDK5RAP1Q96SZ6 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDK5RAP1Q96SZ6 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CDK5RAP1Q96SZ6 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDK5RAP1Q96SZ6 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.65■□□□□ 0.42
CDK5RAP1Q96SZ6 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDK5RAP1Q96SZ6 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CDK5RAP1Q96SZ6 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CDK5RAP1Q96SZ6 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CDK5RAP1Q96SZ6 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CDK5RAP1Q96SZ6 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDK5RAP1Q96SZ6 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CDK5RAP1Q96SZ6 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CDK5RAP1Q96SZ6 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms