Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
RAB40CQ96S21 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAB40CQ96S21 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAB40CQ96S21 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
RAB40CQ96S21 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAB40CQ96S21 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAB40CQ96S21 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC13.89□□□□□ -0.19
RAB40CQ96S21 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAB40CQ96S21 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
RAB40CQ96S21 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAB40CQ96S21 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAB40CQ96S21 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAB40CQ96S21 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAB40CQ96S21 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC13.89□□□□□ -0.19
RAB40CQ96S21 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RAB40CQ96S21 PON3-205ENST00000451904 1053 ntTSL 3 BASIC13.89□□□□□ -0.19
RAB40CQ96S21 RPS20-210ENST00000523936 899 ntTSL 2 BASIC13.89□□□□□ -0.19
RAB40CQ96S21 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RAB40CQ96S21 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC13.89□□□□□ -0.19
RAB40CQ96S21 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RAB40CQ96S21 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAB40CQ96S21 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
RAB40CQ96S21 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAB40CQ96S21 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC13.89□□□□□ -0.19
RAB40CQ96S21 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RAB40CQ96S21 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RAB40CQ96S21 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAB40CQ96S21 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAB40CQ96S21 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAB40CQ96S21 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RAB40CQ96S21 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
RAB40CQ96S21 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RAB40CQ96S21 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC13.89□□□□□ -0.19
RAB40CQ96S21 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAB40CQ96S21 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAB40CQ96S21 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAB40CQ96S21 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAB40CQ96S21 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAB40CQ96S21 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RAB40CQ96S21 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC13.88□□□□□ -0.19
RAB40CQ96S21 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RAB40CQ96S21 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
RAB40CQ96S21 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAB40CQ96S21 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAB40CQ96S21 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC13.88□□□□□ -0.19
RAB40CQ96S21 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC13.88□□□□□ -0.19
RAB40CQ96S21 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC13.88□□□□□ -0.19
RAB40CQ96S21 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC13.88□□□□□ -0.19
RAB40CQ96S21 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC13.88□□□□□ -0.19
RAB40CQ96S21 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAB40CQ96S21 CRAT-202ENST00000393384 973 ntTSL 2 BASIC13.88□□□□□ -0.19
RAB40CQ96S21 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC13.88□□□□□ -0.19
RAB40CQ96S21 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC13.88□□□□□ -0.19
RAB40CQ96S21 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAB40CQ96S21 GXYLT1P3-201ENST00000453058 1193 ntBASIC13.88□□□□□ -0.19
RAB40CQ96S21 ECEL1P2-202ENST00000465689 757 ntBASIC13.88□□□□□ -0.19
RAB40CQ96S21 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC13.88□□□□□ -0.19
RAB40CQ96S21 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC13.88□□□□□ -0.19
RAB40CQ96S21 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAB40CQ96S21 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAB40CQ96S21 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
RAB40CQ96S21 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
RAB40CQ96S21 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC13.88□□□□□ -0.19
RAB40CQ96S21 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RAB40CQ96S21 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
RAB40CQ96S21 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RAB40CQ96S21 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAB40CQ96S21 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
RAB40CQ96S21 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAB40CQ96S21 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC13.88□□□□□ -0.19
RAB40CQ96S21 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
RAB40CQ96S21 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RAB40CQ96S21 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC13.88□□□□□ -0.19
RAB40CQ96S21 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
RAB40CQ96S21 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
RAB40CQ96S21 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAB40CQ96S21 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAB40CQ96S21 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC13.88□□□□□ -0.19
RAB40CQ96S21 TUBB8P12-201ENST00000308911 1335 ntBASIC13.88□□□□□ -0.19
RAB40CQ96S21 TUBB7P-202ENST00000428444 1305 ntBASIC13.88□□□□□ -0.19
RAB40CQ96S21 TUBB8P7-204ENST00000567960 1332 ntBASIC13.88□□□□□ -0.19
RAB40CQ96S21 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAB40CQ96S21 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC13.88□□□□□ -0.19
RAB40CQ96S21 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC13.88□□□□□ -0.19
RAB40CQ96S21 MTHFR-217ENST00000641820 1569 ntBASIC13.88□□□□□ -0.19
RAB40CQ96S21 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
RAB40CQ96S21 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
RAB40CQ96S21 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC13.87□□□□□ -0.19
RAB40CQ96S21 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RAB40CQ96S21 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RAB40CQ96S21 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC13.87□□□□□ -0.19
RAB40CQ96S21 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RAB40CQ96S21 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RAB40CQ96S21 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
RAB40CQ96S21 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RAB40CQ96S21 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RAB40CQ96S21 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RAB40CQ96S21 LINC01568-207ENST00000641790 1380 ntBASIC13.87□□□□□ -0.19
RAB40CQ96S21 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RAB40CQ96S21 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms