Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RPRD1AQ96P16 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RPRD1AQ96P16 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RPRD1AQ96P16 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
RPRD1AQ96P16 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RPRD1AQ96P16 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.58■□□□□ 0.41
RPRD1AQ96P16 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RPRD1AQ96P16 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RPRD1AQ96P16 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.58■□□□□ 0.41
RPRD1AQ96P16 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
RPRD1AQ96P16 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
RPRD1AQ96P16 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
RPRD1AQ96P16 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.58■□□□□ 0.41
RPRD1AQ96P16 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RPRD1AQ96P16 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RPRD1AQ96P16 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RPRD1AQ96P16 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RPRD1AQ96P16 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RPRD1AQ96P16 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
RPRD1AQ96P16 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RPRD1AQ96P16 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.58■□□□□ 0.4
RPRD1AQ96P16 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.58■□□□□ 0.4
RPRD1AQ96P16 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RPRD1AQ96P16 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.58■□□□□ 0.4
RPRD1AQ96P16 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RPRD1AQ96P16 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RPRD1AQ96P16 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
RPRD1AQ96P16 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
RPRD1AQ96P16 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RPRD1AQ96P16 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RPRD1AQ96P16 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RPRD1AQ96P16 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RPRD1AQ96P16 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.57■□□□□ 0.4
RPRD1AQ96P16 FRMD8P1-201ENST00000440433 1524 ntBASIC17.57■□□□□ 0.4
RPRD1AQ96P16 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RPRD1AQ96P16 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RPRD1AQ96P16 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.57■□□□□ 0.4
RPRD1AQ96P16 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
RPRD1AQ96P16 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RPRD1AQ96P16 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RPRD1AQ96P16 AC092053.1-201ENST00000605787 1936 ntBASIC17.57■□□□□ 0.4
RPRD1AQ96P16 AC002310.6-201ENST00000624451 1377 ntBASIC17.57■□□□□ 0.4
RPRD1AQ96P16 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RPRD1AQ96P16 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RPRD1AQ96P16 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.57■□□□□ 0.4
RPRD1AQ96P16 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
RPRD1AQ96P16 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC17.57■□□□□ 0.4
RPRD1AQ96P16 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.57■□□□□ 0.4
RPRD1AQ96P16 HCG4B-203ENST00000450128 991 ntBASIC17.57■□□□□ 0.4
RPRD1AQ96P16 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.57■□□□□ 0.4
RPRD1AQ96P16 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.57■□□□□ 0.4
RPRD1AQ96P16 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.57■□□□□ 0.4
RPRD1AQ96P16 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
RPRD1AQ96P16 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.57■□□□□ 0.4
RPRD1AQ96P16 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RPRD1AQ96P16 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RPRD1AQ96P16 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
RPRD1AQ96P16 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
RPRD1AQ96P16 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RPRD1AQ96P16 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RPRD1AQ96P16 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RPRD1AQ96P16 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
RPRD1AQ96P16 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RPRD1AQ96P16 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RPRD1AQ96P16 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.57■□□□□ 0.4
RPRD1AQ96P16 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.57■□□□□ 0.4
RPRD1AQ96P16 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RPRD1AQ96P16 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RPRD1AQ96P16 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RPRD1AQ96P16 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
RPRD1AQ96P16 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
RPRD1AQ96P16 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RPRD1AQ96P16 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
RPRD1AQ96P16 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RPRD1AQ96P16 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RPRD1AQ96P16 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
RPRD1AQ96P16 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.56■□□□□ 0.4
RPRD1AQ96P16 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.56■□□□□ 0.4
RPRD1AQ96P16 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RPRD1AQ96P16 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.56■□□□□ 0.4
RPRD1AQ96P16 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.56■□□□□ 0.4
RPRD1AQ96P16 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RPRD1AQ96P16 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RPRD1AQ96P16 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.56■□□□□ 0.4
RPRD1AQ96P16 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
RPRD1AQ96P16 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC17.56■□□□□ 0.4
RPRD1AQ96P16 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
RPRD1AQ96P16 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC17.56■□□□□ 0.4
RPRD1AQ96P16 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.56■□□□□ 0.4
RPRD1AQ96P16 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
RPRD1AQ96P16 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.56■□□□□ 0.4
RPRD1AQ96P16 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.56■□□□□ 0.4
RPRD1AQ96P16 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
RPRD1AQ96P16 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RPRD1AQ96P16 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
RPRD1AQ96P16 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.56■□□□□ 0.4
RPRD1AQ96P16 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RPRD1AQ96P16 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RPRD1AQ96P16 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
RPRD1AQ96P16 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms