Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 FALEC-201ENST00000416894 566 ntTSL 3 BASIC18.36■□□□□ 0.53
SNX27Q96L92 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNX27Q96L92 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC18.36■□□□□ 0.53
SNX27Q96L92 HARS-203ENST00000431330 1774 ntTSL 2 BASIC18.36■□□□□ 0.53
SNX27Q96L92 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC18.36■□□□□ 0.53
SNX27Q96L92 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SNX27Q96L92 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC18.36■□□□□ 0.53
SNX27Q96L92 FOS-208ENST00000555686 1496 ntTSL 2 BASIC18.36■□□□□ 0.53
SNX27Q96L92 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC18.36■□□□□ 0.53
SNX27Q96L92 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC18.36■□□□□ 0.53
SNX27Q96L92 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNX27Q96L92 BSG-214ENST00000614867 960 ntTSL 3 BASIC18.36■□□□□ 0.53
SNX27Q96L92 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNX27Q96L92 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
SNX27Q96L92 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNX27Q96L92 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNX27Q96L92 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNX27Q96L92 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC18.35■□□□□ 0.53
SNX27Q96L92 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC18.35■□□□□ 0.53
SNX27Q96L92 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SNX27Q96L92 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SNX27Q96L92 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNX27Q96L92 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
SNX27Q96L92 AC092919.2-201ENST00000623631 1645 ntBASIC18.35■□□□□ 0.53
SNX27Q96L92 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNX27Q96L92 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
SNX27Q96L92 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SNX27Q96L92 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC18.35■□□□□ 0.53
SNX27Q96L92 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNX27Q96L92 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNX27Q96L92 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SNX27Q96L92 TOP3BP1-201ENST00000420768 1380 ntBASIC18.35■□□□□ 0.53
SNX27Q96L92 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.35■□□□□ 0.53
SNX27Q96L92 REM2-202ENST00000536884 1331 ntTSL 2 BASIC18.35■□□□□ 0.53
SNX27Q96L92 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNX27Q96L92 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNX27Q96L92 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC18.35■□□□□ 0.53
SNX27Q96L92 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNX27Q96L92 AC015922.1-201ENST00000421102 1152 ntBASIC18.35■□□□□ 0.53
SNX27Q96L92 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNX27Q96L92 MKNK2P1-201ENST00000437526 628 ntBASIC18.35■□□□□ 0.53
SNX27Q96L92 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC18.35■□□□□ 0.53
SNX27Q96L92 AC124947.2-201ENST00000547118 1133 ntBASIC18.35■□□□□ 0.53
SNX27Q96L92 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC18.35■□□□□ 0.53
SNX27Q96L92 AL645728.2-201ENST00000641974 660 ntBASIC18.35■□□□□ 0.53
SNX27Q96L92 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNX27Q96L92 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNX27Q96L92 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.35■□□□□ 0.53
SNX27Q96L92 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNX27Q96L92 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNX27Q96L92 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SNX27Q96L92 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.35■□□□□ 0.53
SNX27Q96L92 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SNX27Q96L92 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
SNX27Q96L92 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNX27Q96L92 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.35■□□□□ 0.53
SNX27Q96L92 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNX27Q96L92 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNX27Q96L92 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.34■□□□□ 0.53
SNX27Q96L92 AL023806.1-201ENST00000603994 1649 ntBASIC18.34■□□□□ 0.53
SNX27Q96L92 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC18.34■□□□□ 0.53
SNX27Q96L92 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC18.34■□□□□ 0.53
SNX27Q96L92 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC18.34■□□□□ 0.53
SNX27Q96L92 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNX27Q96L92 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.34■□□□□ 0.53
SNX27Q96L92 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
SNX27Q96L92 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNX27Q96L92 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC18.34■□□□□ 0.53
SNX27Q96L92 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNX27Q96L92 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SNX27Q96L92 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
SNX27Q96L92 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC18.34■□□□□ 0.53
SNX27Q96L92 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC18.34■□□□□ 0.53
SNX27Q96L92 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC18.34■□□□□ 0.53
SNX27Q96L92 FAM58CP-201ENST00000435741 640 ntBASIC18.34■□□□□ 0.53
SNX27Q96L92 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SNX27Q96L92 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC18.34■□□□□ 0.53
SNX27Q96L92 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNX27Q96L92 SNHG9-202ENST00000564014 471 ntBASIC18.34■□□□□ 0.53
SNX27Q96L92 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC18.34■□□□□ 0.53
SNX27Q96L92 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC18.34■□□□□ 0.53
SNX27Q96L92 AC091812.2-201ENST00000619081 385 ntBASIC18.34■□□□□ 0.53
SNX27Q96L92 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC18.34■□□□□ 0.53
SNX27Q96L92 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNX27Q96L92 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.34■□□□□ 0.53
SNX27Q96L92 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.34■□□□□ 0.53
SNX27Q96L92 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SNX27Q96L92 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC18.34■□□□□ 0.53
SNX27Q96L92 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNX27Q96L92 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNX27Q96L92 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.34■□□□□ 0.53
SNX27Q96L92 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.34■□□□□ 0.53
SNX27Q96L92 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SNX27Q96L92 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNX27Q96L92 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
SNX27Q96L92 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNX27Q96L92 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNX27Q96L92 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.33■□□□□ 0.53
SNX27Q96L92 AC092053.1-201ENST00000605787 1936 ntBASIC18.33■□□□□ 0.53
SNX27Q96L92 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms