Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SMARCD1Q96GM5 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.92■□□□□ 0.46
SMARCD1Q96GM5 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SMARCD1Q96GM5 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SMARCD1Q96GM5 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SMARCD1Q96GM5 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SMARCD1Q96GM5 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
SMARCD1Q96GM5 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SMARCD1Q96GM5 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SMARCD1Q96GM5 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.91■□□□□ 0.46
SMARCD1Q96GM5 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.91■□□□□ 0.46
SMARCD1Q96GM5 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SMARCD1Q96GM5 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SMARCD1Q96GM5 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SMARCD1Q96GM5 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
SMARCD1Q96GM5 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
SMARCD1Q96GM5 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.91■□□□□ 0.46
SMARCD1Q96GM5 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SMARCD1Q96GM5 MCCD1P2-201ENST00000423228 335 ntBASIC17.91■□□□□ 0.46
SMARCD1Q96GM5 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.91■□□□□ 0.46
SMARCD1Q96GM5 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
SMARCD1Q96GM5 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
SMARCD1Q96GM5 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.91■□□□□ 0.46
SMARCD1Q96GM5 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
SMARCD1Q96GM5 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.91■□□□□ 0.46
SMARCD1Q96GM5 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.91■□□□□ 0.46
SMARCD1Q96GM5 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.91■□□□□ 0.46
SMARCD1Q96GM5 MTDHP5-201ENST00000598980 586 ntBASIC17.91■□□□□ 0.46
SMARCD1Q96GM5 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC17.91■□□□□ 0.46
SMARCD1Q96GM5 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SMARCD1Q96GM5 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SMARCD1Q96GM5 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SMARCD1Q96GM5 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.91■□□□□ 0.46
SMARCD1Q96GM5 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SMARCD1Q96GM5 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SMARCD1Q96GM5 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SMARCD1Q96GM5 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SMARCD1Q96GM5 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
SMARCD1Q96GM5 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
SMARCD1Q96GM5 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
SMARCD1Q96GM5 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.91■□□□□ 0.46
SMARCD1Q96GM5 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SMARCD1Q96GM5 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SMARCD1Q96GM5 KRT8P49-201ENST00000604166 1432 ntBASIC17.9■□□□□ 0.46
SMARCD1Q96GM5 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
SMARCD1Q96GM5 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SMARCD1Q96GM5 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SMARCD1Q96GM5 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.9■□□□□ 0.46
SMARCD1Q96GM5 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SMARCD1Q96GM5 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
SMARCD1Q96GM5 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.9■□□□□ 0.46
SMARCD1Q96GM5 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.9■□□□□ 0.46
SMARCD1Q96GM5 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.9■□□□□ 0.46
SMARCD1Q96GM5 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.9■□□□□ 0.46
SMARCD1Q96GM5 HOTTIP_1.1-201ENST00000620415 57 ntBASIC17.9■□□□□ 0.46
SMARCD1Q96GM5 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SMARCD1Q96GM5 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.9■□□□□ 0.46
SMARCD1Q96GM5 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SMARCD1Q96GM5 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SMARCD1Q96GM5 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SMARCD1Q96GM5 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SMARCD1Q96GM5 AC108860.2-201ENST00000562760 2183 ntBASIC17.9■□□□□ 0.46
SMARCD1Q96GM5 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SMARCD1Q96GM5 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SMARCD1Q96GM5 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SMARCD1Q96GM5 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SMARCD1Q96GM5 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
SMARCD1Q96GM5 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.89■□□□□ 0.46
SMARCD1Q96GM5 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SMARCD1Q96GM5 AL353732.1-201ENST00000569618 1459 ntBASIC17.89■□□□□ 0.45
SMARCD1Q96GM5 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SMARCD1Q96GM5 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SMARCD1Q96GM5 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SMARCD1Q96GM5 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SMARCD1Q96GM5 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.89■□□□□ 0.45
SMARCD1Q96GM5 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.89■□□□□ 0.45
SMARCD1Q96GM5 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SMARCD1Q96GM5 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SMARCD1Q96GM5 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
SMARCD1Q96GM5 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SMARCD1Q96GM5 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.89■□□□□ 0.45
SMARCD1Q96GM5 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.89■□□□□ 0.45
SMARCD1Q96GM5 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SMARCD1Q96GM5 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
SMARCD1Q96GM5 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SMARCD1Q96GM5 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
SMARCD1Q96GM5 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.89■□□□□ 0.45
SMARCD1Q96GM5 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SMARCD1Q96GM5 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SMARCD1Q96GM5 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.89■□□□□ 0.45
SMARCD1Q96GM5 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SMARCD1Q96GM5 AC091167.2-201ENST00000579581 588 ntBASIC17.89■□□□□ 0.45
SMARCD1Q96GM5 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.89■□□□□ 0.45
SMARCD1Q96GM5 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SMARCD1Q96GM5 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.89■□□□□ 0.45
SMARCD1Q96GM5 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
SMARCD1Q96GM5 AL645728.2-201ENST00000641974 660 ntBASIC17.89■□□□□ 0.45
SMARCD1Q96GM5 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SMARCD1Q96GM5 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
SMARCD1Q96GM5 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms