Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 FAM207CP-201ENST00000443486 507 ntBASIC22.23■■□□□ 1.15
RAPGEF4Q8WZA2 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC22.23■■□□□ 1.15
RAPGEF4Q8WZA2 AC097493.3-201ENST00000509725 367 ntBASIC22.23■■□□□ 1.15
RAPGEF4Q8WZA2 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC22.23■■□□□ 1.15
RAPGEF4Q8WZA2 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC22.23■■□□□ 1.15
RAPGEF4Q8WZA2 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
RAPGEF4Q8WZA2 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RAPGEF4Q8WZA2 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC22.23■■□□□ 1.15
RAPGEF4Q8WZA2 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC22.23■■□□□ 1.15
RAPGEF4Q8WZA2 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
RAPGEF4Q8WZA2 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
RAPGEF4Q8WZA2 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
RAPGEF4Q8WZA2 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RAPGEF4Q8WZA2 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
RAPGEF4Q8WZA2 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC22.22■■□□□ 1.15
RAPGEF4Q8WZA2 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RAPGEF4Q8WZA2 FOS-208ENST00000555686 1496 ntTSL 2 BASIC22.22■■□□□ 1.15
RAPGEF4Q8WZA2 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
RAPGEF4Q8WZA2 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
RAPGEF4Q8WZA2 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC22.22■■□□□ 1.15
RAPGEF4Q8WZA2 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
RAPGEF4Q8WZA2 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RAPGEF4Q8WZA2 AC135050.7-201ENST00000624508 2218 ntBASIC22.22■■□□□ 1.15
RAPGEF4Q8WZA2 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
RAPGEF4Q8WZA2 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
RAPGEF4Q8WZA2 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
RAPGEF4Q8WZA2 AC005034.1-201ENST00000426657 489 ntBASIC22.22■■□□□ 1.15
RAPGEF4Q8WZA2 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC22.22■■□□□ 1.15
RAPGEF4Q8WZA2 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
RAPGEF4Q8WZA2 RBM7-207ENST00000544582 692 ntTSL 3 BASIC22.22■■□□□ 1.15
RAPGEF4Q8WZA2 MPDU1-223ENST00000582151 728 ntBASIC22.22■■□□□ 1.15
RAPGEF4Q8WZA2 AC008761.3-201ENST00000624803 892 ntBASIC22.22■■□□□ 1.15
RAPGEF4Q8WZA2 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RAPGEF4Q8WZA2 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
RAPGEF4Q8WZA2 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RAPGEF4Q8WZA2 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
RAPGEF4Q8WZA2 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RAPGEF4Q8WZA2 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RAPGEF4Q8WZA2 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RAPGEF4Q8WZA2 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC22.22■■□□□ 1.15
RAPGEF4Q8WZA2 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC22.22■■□□□ 1.15
RAPGEF4Q8WZA2 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC22.21■■□□□ 1.15
RAPGEF4Q8WZA2 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RAPGEF4Q8WZA2 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
RAPGEF4Q8WZA2 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC22.21■■□□□ 1.15
RAPGEF4Q8WZA2 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
RAPGEF4Q8WZA2 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC22.21■■□□□ 1.15
RAPGEF4Q8WZA2 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
RAPGEF4Q8WZA2 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC22.21■■□□□ 1.15
RAPGEF4Q8WZA2 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RAPGEF4Q8WZA2 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC22.21■■□□□ 1.15
RAPGEF4Q8WZA2 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC22.21■■□□□ 1.15
RAPGEF4Q8WZA2 LINC02560-201ENST00000596379 459 ntBASIC22.21■■□□□ 1.15
RAPGEF4Q8WZA2 AL035252.4-201ENST00000624174 288 ntBASIC22.21■■□□□ 1.15
RAPGEF4Q8WZA2 HFE2-206ENST00000634927 506 ntTSL 4 BASIC22.21■■□□□ 1.15
RAPGEF4Q8WZA2 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC22.21■■□□□ 1.15
RAPGEF4Q8WZA2 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC22.21■■□□□ 1.15
RAPGEF4Q8WZA2 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
RAPGEF4Q8WZA2 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
RAPGEF4Q8WZA2 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
RAPGEF4Q8WZA2 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
RAPGEF4Q8WZA2 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
RAPGEF4Q8WZA2 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC22.21■■□□□ 1.15
RAPGEF4Q8WZA2 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
RAPGEF4Q8WZA2 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC22.2■■□□□ 1.15
RAPGEF4Q8WZA2 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC22.2■■□□□ 1.15
RAPGEF4Q8WZA2 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC22.2■■□□□ 1.14
RAPGEF4Q8WZA2 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC22.2■■□□□ 1.14
RAPGEF4Q8WZA2 AC093525.9-201ENST00000624961 1746 ntBASIC22.2■■□□□ 1.14
RAPGEF4Q8WZA2 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC22.2■■□□□ 1.14
RAPGEF4Q8WZA2 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RAPGEF4Q8WZA2 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RAPGEF4Q8WZA2 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
RAPGEF4Q8WZA2 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
RAPGEF4Q8WZA2 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RAPGEF4Q8WZA2 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
RAPGEF4Q8WZA2 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC22.2■■□□□ 1.14
RAPGEF4Q8WZA2 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC22.2■■□□□ 1.14
RAPGEF4Q8WZA2 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC22.2■■□□□ 1.14
RAPGEF4Q8WZA2 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC22.2■■□□□ 1.14
RAPGEF4Q8WZA2 MIR4453-201ENST00000584019 89 ntBASIC22.2■■□□□ 1.14
RAPGEF4Q8WZA2 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC22.2■■□□□ 1.14
RAPGEF4Q8WZA2 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
RAPGEF4Q8WZA2 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
RAPGEF4Q8WZA2 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC22.2■■□□□ 1.14
RAPGEF4Q8WZA2 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RAPGEF4Q8WZA2 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC22.2■■□□□ 1.14
RAPGEF4Q8WZA2 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
RAPGEF4Q8WZA2 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RAPGEF4Q8WZA2 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RAPGEF4Q8WZA2 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
RAPGEF4Q8WZA2 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RAPGEF4Q8WZA2 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
RAPGEF4Q8WZA2 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
RAPGEF4Q8WZA2 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
RAPGEF4Q8WZA2 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
RAPGEF4Q8WZA2 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
RAPGEF4Q8WZA2 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
RAPGEF4Q8WZA2 SLC25A1P3-201ENST00000395415 828 ntBASIC22.19■■□□□ 1.14
RAPGEF4Q8WZA2 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC22.19■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms