Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.34■□□□□ 0.37
PTCD2Q8WV60 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.34■□□□□ 0.37
PTCD2Q8WV60 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.34■□□□□ 0.37
PTCD2Q8WV60 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTCD2Q8WV60 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.34■□□□□ 0.37
PTCD2Q8WV60 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTCD2Q8WV60 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTCD2Q8WV60 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTCD2Q8WV60 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PTCD2Q8WV60 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
PTCD2Q8WV60 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
PTCD2Q8WV60 PKD1P1-201ENST00000458669 6805 ntBASIC17.33■□□□□ 0.37
PTCD2Q8WV60 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.33■□□□□ 0.37
PTCD2Q8WV60 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PTCD2Q8WV60 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.33■□□□□ 0.37
PTCD2Q8WV60 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
PTCD2Q8WV60 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PTCD2Q8WV60 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PTCD2Q8WV60 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PTCD2Q8WV60 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PTCD2Q8WV60 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PTCD2Q8WV60 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PTCD2Q8WV60 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.33■□□□□ 0.36
PTCD2Q8WV60 AL022342.1-201ENST00000400363 863 ntBASIC17.33■□□□□ 0.36
PTCD2Q8WV60 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
PTCD2Q8WV60 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC17.33■□□□□ 0.36
PTCD2Q8WV60 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
PTCD2Q8WV60 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.33■□□□□ 0.36
PTCD2Q8WV60 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.33■□□□□ 0.36
PTCD2Q8WV60 MTDHP4-201ENST00000600287 670 ntBASIC17.33■□□□□ 0.36
PTCD2Q8WV60 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.33■□□□□ 0.36
PTCD2Q8WV60 AC120114.3-201ENST00000611923 658 ntBASIC17.33■□□□□ 0.36
PTCD2Q8WV60 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.33■□□□□ 0.36
PTCD2Q8WV60 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
PTCD2Q8WV60 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PTCD2Q8WV60 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PTCD2Q8WV60 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PTCD2Q8WV60 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PTCD2Q8WV60 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PTCD2Q8WV60 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PTCD2Q8WV60 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
PTCD2Q8WV60 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.33■□□□□ 0.36
PTCD2Q8WV60 AC011676.5-201ENST00000624864 2660 ntBASIC17.33■□□□□ 0.36
PTCD2Q8WV60 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.33■□□□□ 0.36
PTCD2Q8WV60 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.33■□□□□ 0.36
PTCD2Q8WV60 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
PTCD2Q8WV60 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTCD2Q8WV60 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTCD2Q8WV60 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PTCD2Q8WV60 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PTCD2Q8WV60 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PTCD2Q8WV60 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTCD2Q8WV60 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.32■□□□□ 0.36
PTCD2Q8WV60 FRMD8P1-201ENST00000440433 1524 ntBASIC17.32■□□□□ 0.36
PTCD2Q8WV60 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTCD2Q8WV60 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.32■□□□□ 0.36
PTCD2Q8WV60 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTCD2Q8WV60 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PTCD2Q8WV60 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
PTCD2Q8WV60 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTCD2Q8WV60 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTCD2Q8WV60 IL9RP2-201ENST00000423948 1312 ntBASIC17.32■□□□□ 0.36
PTCD2Q8WV60 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.32■□□□□ 0.36
PTCD2Q8WV60 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PTCD2Q8WV60 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
PTCD2Q8WV60 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTCD2Q8WV60 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PTCD2Q8WV60 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
PTCD2Q8WV60 AL590627.1-203ENST00000421194 1026 ntBASIC17.32■□□□□ 0.36
PTCD2Q8WV60 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC17.32■□□□□ 0.36
PTCD2Q8WV60 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.32■□□□□ 0.36
PTCD2Q8WV60 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.32■□□□□ 0.36
PTCD2Q8WV60 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.32■□□□□ 0.36
PTCD2Q8WV60 AL158211.2-201ENST00000607282 395 ntBASIC17.32■□□□□ 0.36
PTCD2Q8WV60 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.32■□□□□ 0.36
PTCD2Q8WV60 AL139288.1-201ENST00000623748 933 ntBASIC17.32■□□□□ 0.36
PTCD2Q8WV60 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
PTCD2Q8WV60 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
PTCD2Q8WV60 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.32■□□□□ 0.36
PTCD2Q8WV60 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
PTCD2Q8WV60 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.32■□□□□ 0.36
PTCD2Q8WV60 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTCD2Q8WV60 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTCD2Q8WV60 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.32■□□□□ 0.36
PTCD2Q8WV60 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.32■□□□□ 0.36
PTCD2Q8WV60 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PTCD2Q8WV60 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.31■□□□□ 0.36
PTCD2Q8WV60 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.31■□□□□ 0.36
PTCD2Q8WV60 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTCD2Q8WV60 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
PTCD2Q8WV60 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.31■□□□□ 0.36
PTCD2Q8WV60 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
PTCD2Q8WV60 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTCD2Q8WV60 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
PTCD2Q8WV60 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTCD2Q8WV60 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PTCD2Q8WV60 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PTCD2Q8WV60 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
PTCD2Q8WV60 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.31■□□□□ 0.36
PTCD2Q8WV60 AL603841.1-201ENST00000430516 664 ntBASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms