Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
U2AF1L4Q8WU68 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
U2AF1L4Q8WU68 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC19.52■□□□□ 0.72
U2AF1L4Q8WU68 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
U2AF1L4Q8WU68 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
U2AF1L4Q8WU68 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
U2AF1L4Q8WU68 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
U2AF1L4Q8WU68 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
U2AF1L4Q8WU68 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
U2AF1L4Q8WU68 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
U2AF1L4Q8WU68 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC19.52■□□□□ 0.72
U2AF1L4Q8WU68 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC19.52■□□□□ 0.72
U2AF1L4Q8WU68 FAM185BP-201ENST00000443595 716 ntBASIC19.52■□□□□ 0.72
U2AF1L4Q8WU68 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC19.52■□□□□ 0.72
U2AF1L4Q8WU68 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC19.52■□□□□ 0.72
U2AF1L4Q8WU68 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC19.52■□□□□ 0.72
U2AF1L4Q8WU68 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC19.52■□□□□ 0.72
U2AF1L4Q8WU68 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC19.52■□□□□ 0.72
U2AF1L4Q8WU68 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
U2AF1L4Q8WU68 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC19.52■□□□□ 0.72
U2AF1L4Q8WU68 HFE2-206ENST00000634927 506 ntTSL 4 BASIC19.52■□□□□ 0.72
U2AF1L4Q8WU68 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
U2AF1L4Q8WU68 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
U2AF1L4Q8WU68 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
U2AF1L4Q8WU68 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
U2AF1L4Q8WU68 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC19.52■□□□□ 0.71
U2AF1L4Q8WU68 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
U2AF1L4Q8WU68 LTB4R2-202ENST00000528054 3092 ntBASIC19.52■□□□□ 0.71
U2AF1L4Q8WU68 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
U2AF1L4Q8WU68 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
U2AF1L4Q8WU68 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
U2AF1L4Q8WU68 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC19.51■□□□□ 0.71
U2AF1L4Q8WU68 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC19.51■□□□□ 0.71
U2AF1L4Q8WU68 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
U2AF1L4Q8WU68 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
U2AF1L4Q8WU68 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
U2AF1L4Q8WU68 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
U2AF1L4Q8WU68 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC19.51■□□□□ 0.71
U2AF1L4Q8WU68 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
U2AF1L4Q8WU68 LINC00982-205ENST00000420957 435 ntBASIC19.51■□□□□ 0.71
U2AF1L4Q8WU68 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC19.51■□□□□ 0.71
U2AF1L4Q8WU68 AC107890.1-201ENST00000422478 521 ntBASIC19.51■□□□□ 0.71
U2AF1L4Q8WU68 AL671277.1-201ENST00000429656 993 ntBASIC19.51■□□□□ 0.71
U2AF1L4Q8WU68 AL513480.1-201ENST00000451731 511 ntBASIC19.51■□□□□ 0.71
U2AF1L4Q8WU68 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
U2AF1L4Q8WU68 STK19B-204ENST00000512515 211 ntBASIC19.51■□□□□ 0.71
U2AF1L4Q8WU68 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC19.51■□□□□ 0.71
U2AF1L4Q8WU68 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC19.51■□□□□ 0.71
U2AF1L4Q8WU68 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC19.51■□□□□ 0.71
U2AF1L4Q8WU68 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC19.51■□□□□ 0.71
U2AF1L4Q8WU68 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC19.51■□□□□ 0.71
U2AF1L4Q8WU68 AC019129.2-201ENST00000609837 1235 ntBASIC19.51■□□□□ 0.71
U2AF1L4Q8WU68 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
U2AF1L4Q8WU68 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
U2AF1L4Q8WU68 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
U2AF1L4Q8WU68 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
U2AF1L4Q8WU68 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
U2AF1L4Q8WU68 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
U2AF1L4Q8WU68 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC19.51■□□□□ 0.71
U2AF1L4Q8WU68 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
U2AF1L4Q8WU68 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
U2AF1L4Q8WU68 OR6D1P-202ENST00000641007 5290 ntBASIC19.51■□□□□ 0.71
U2AF1L4Q8WU68 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
U2AF1L4Q8WU68 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
U2AF1L4Q8WU68 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
U2AF1L4Q8WU68 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
U2AF1L4Q8WU68 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
U2AF1L4Q8WU68 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
U2AF1L4Q8WU68 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
U2AF1L4Q8WU68 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC19.5■□□□□ 0.71
U2AF1L4Q8WU68 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC19.5■□□□□ 0.71
U2AF1L4Q8WU68 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
U2AF1L4Q8WU68 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
U2AF1L4Q8WU68 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
U2AF1L4Q8WU68 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.5■□□□□ 0.71
U2AF1L4Q8WU68 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
U2AF1L4Q8WU68 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
U2AF1L4Q8WU68 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
U2AF1L4Q8WU68 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
U2AF1L4Q8WU68 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
U2AF1L4Q8WU68 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
U2AF1L4Q8WU68 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
U2AF1L4Q8WU68 SPDYE11-202ENST00000450699 704 ntBASIC19.5■□□□□ 0.71
U2AF1L4Q8WU68 FAM86C2P-203ENST00000528684 1004 ntBASIC19.5■□□□□ 0.71
U2AF1L4Q8WU68 SLC25A39P2-201ENST00000537614 270 ntBASIC19.5■□□□□ 0.71
U2AF1L4Q8WU68 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC19.5■□□□□ 0.71
U2AF1L4Q8WU68 SPDYE9P-201ENST00000570642 692 ntBASIC19.5■□□□□ 0.71
U2AF1L4Q8WU68 SPDYE10P-202ENST00000612005 668 ntBASIC19.5■□□□□ 0.71
U2AF1L4Q8WU68 SPDYE8P-202ENST00000612377 668 ntBASIC19.5■□□□□ 0.71
U2AF1L4Q8WU68 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.5■□□□□ 0.71
U2AF1L4Q8WU68 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
U2AF1L4Q8WU68 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
U2AF1L4Q8WU68 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
U2AF1L4Q8WU68 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
U2AF1L4Q8WU68 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
U2AF1L4Q8WU68 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
U2AF1L4Q8WU68 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC19.5■□□□□ 0.71
U2AF1L4Q8WU68 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
U2AF1L4Q8WU68 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
U2AF1L4Q8WU68 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms