Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC20.54■□□□□ 0.88
SNED1Q8TER0 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
SNED1Q8TER0 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
SNED1Q8TER0 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC20.54■□□□□ 0.88
SNED1Q8TER0 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SNED1Q8TER0 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SNED1Q8TER0 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.54■□□□□ 0.88
SNED1Q8TER0 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SNED1Q8TER0 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.54■□□□□ 0.88
SNED1Q8TER0 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SNED1Q8TER0 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC20.54■□□□□ 0.88
SNED1Q8TER0 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC20.54■□□□□ 0.88
SNED1Q8TER0 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SNED1Q8TER0 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
SNED1Q8TER0 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SNED1Q8TER0 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SNED1Q8TER0 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
SNED1Q8TER0 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SNED1Q8TER0 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SNED1Q8TER0 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC20.54■□□□□ 0.88
SNED1Q8TER0 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC20.54■□□□□ 0.88
SNED1Q8TER0 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SNED1Q8TER0 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
SNED1Q8TER0 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SNED1Q8TER0 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SNED1Q8TER0 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC20.53■□□□□ 0.88
SNED1Q8TER0 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SNED1Q8TER0 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SNED1Q8TER0 HNRNPA3P1-201ENST00000401429 1139 ntBASIC20.53■□□□□ 0.88
SNED1Q8TER0 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
SNED1Q8TER0 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC20.53■□□□□ 0.88
SNED1Q8TER0 SLC25A6P5-201ENST00000435663 894 ntBASIC20.53■□□□□ 0.88
SNED1Q8TER0 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC20.53■□□□□ 0.88
SNED1Q8TER0 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
SNED1Q8TER0 HNRNPA3P5-201ENST00000455201 833 ntBASIC20.53■□□□□ 0.88
SNED1Q8TER0 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
SNED1Q8TER0 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SNED1Q8TER0 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC20.53■□□□□ 0.88
SNED1Q8TER0 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC20.53■□□□□ 0.88
SNED1Q8TER0 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC20.53■□□□□ 0.88
SNED1Q8TER0 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC20.53■□□□□ 0.88
SNED1Q8TER0 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
SNED1Q8TER0 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC20.53■□□□□ 0.88
SNED1Q8TER0 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SNED1Q8TER0 TP53TG3HP-202ENST00000569755 579 ntBASIC20.53■□□□□ 0.88
SNED1Q8TER0 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
SNED1Q8TER0 MIR4492-201ENST00000581627 80 ntBASIC20.53■□□□□ 0.88
SNED1Q8TER0 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SNED1Q8TER0 IGHV3-72-202ENST00000621503 303 ntBASIC20.53■□□□□ 0.88
SNED1Q8TER0 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC20.53■□□□□ 0.88
SNED1Q8TER0 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SNED1Q8TER0 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SNED1Q8TER0 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SNED1Q8TER0 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC20.53■□□□□ 0.88
SNED1Q8TER0 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SNED1Q8TER0 AC131009.4-201ENST00000624048 1740 ntBASIC20.53■□□□□ 0.88
SNED1Q8TER0 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SNED1Q8TER0 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC20.53■□□□□ 0.88
SNED1Q8TER0 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SNED1Q8TER0 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SNED1Q8TER0 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SNED1Q8TER0 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SNED1Q8TER0 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC20.53■□□□□ 0.88
SNED1Q8TER0 AC079776.1-201ENST00000401540 1152 ntBASIC20.53■□□□□ 0.88
SNED1Q8TER0 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SNED1Q8TER0 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC20.53■□□□□ 0.88
SNED1Q8TER0 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC20.53■□□□□ 0.88
SNED1Q8TER0 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
SNED1Q8TER0 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC20.52■□□□□ 0.88
SNED1Q8TER0 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SNED1Q8TER0 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SNED1Q8TER0 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SNED1Q8TER0 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
SNED1Q8TER0 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SNED1Q8TER0 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC20.52■□□□□ 0.88
SNED1Q8TER0 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SNED1Q8TER0 GRAMD4P3-201ENST00000621665 1669 ntBASIC20.52■□□□□ 0.88
SNED1Q8TER0 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SNED1Q8TER0 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SNED1Q8TER0 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.52■□□□□ 0.88
SNED1Q8TER0 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
SNED1Q8TER0 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SNED1Q8TER0 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SNED1Q8TER0 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SNED1Q8TER0 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SNED1Q8TER0 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.87
SNED1Q8TER0 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SNED1Q8TER0 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC20.52■□□□□ 0.87
SNED1Q8TER0 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
SNED1Q8TER0 ATP5G2P4-201ENST00000442175 420 ntBASIC20.52■□□□□ 0.87
SNED1Q8TER0 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC20.52■□□□□ 0.87
SNED1Q8TER0 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
SNED1Q8TER0 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC20.52■□□□□ 0.87
SNED1Q8TER0 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC20.52■□□□□ 0.87
SNED1Q8TER0 MPDU1-223ENST00000582151 728 ntBASIC20.52■□□□□ 0.87
SNED1Q8TER0 AL132655.2-201ENST00000596276 594 ntBASIC20.52■□□□□ 0.87
SNED1Q8TER0 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SNED1Q8TER0 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
SNED1Q8TER0 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SNED1Q8TER0 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms