Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
SPTSSBQ8NFR3 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
SPTSSBQ8NFR3 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
SPTSSBQ8NFR3 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC9.38□□□□□ -0.91
SPTSSBQ8NFR3 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC9.38□□□□□ -0.91
SPTSSBQ8NFR3 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC9.38□□□□□ -0.91
SPTSSBQ8NFR3 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC9.38□□□□□ -0.91
SPTSSBQ8NFR3 MIR3621-201ENST00000580529 85 ntBASIC9.38□□□□□ -0.91
SPTSSBQ8NFR3 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC9.38□□□□□ -0.91
SPTSSBQ8NFR3 AC012354.3-201ENST00000623734 483 ntBASIC9.38□□□□□ -0.91
SPTSSBQ8NFR3 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
SPTSSBQ8NFR3 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
SPTSSBQ8NFR3 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
SPTSSBQ8NFR3 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC9.38□□□□□ -0.91
SPTSSBQ8NFR3 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
SPTSSBQ8NFR3 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
SPTSSBQ8NFR3 CYP21A1P-202ENST00000354927 1481 ntBASIC9.38□□□□□ -0.91
SPTSSBQ8NFR3 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC9.38□□□□□ -0.91
SPTSSBQ8NFR3 CYB5RL-201ENST00000287899 5777 ntTSL 3 BASIC9.38□□□□□ -0.91
SPTSSBQ8NFR3 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC9.38□□□□□ -0.91
SPTSSBQ8NFR3 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
SPTSSBQ8NFR3 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
SPTSSBQ8NFR3 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC9.38□□□□□ -0.91
SPTSSBQ8NFR3 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
SPTSSBQ8NFR3 ERVK13-1-205ENST00000568395 5578 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
SPTSSBQ8NFR3 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC9.38□□□□□ -0.91
SPTSSBQ8NFR3 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC9.38□□□□□ -0.91
SPTSSBQ8NFR3 VPS13A-205ENST00000376636 11145 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
SPTSSBQ8NFR3 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC9.38□□□□□ -0.91
SPTSSBQ8NFR3 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
SPTSSBQ8NFR3 RALGPS1-201ENST00000259351 6336 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
SPTSSBQ8NFR3 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
SPTSSBQ8NFR3 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
SPTSSBQ8NFR3 AC006116.8-202ENST00000587620 1550 ntBASIC9.37□□□□□ -0.91
SPTSSBQ8NFR3 AC116351.2-201ENST00000606540 1585 ntBASIC9.37□□□□□ -0.91
SPTSSBQ8NFR3 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
SPTSSBQ8NFR3 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC9.37□□□□□ -0.91
SPTSSBQ8NFR3 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC9.37□□□□□ -0.91
SPTSSBQ8NFR3 AC005562.1-201ENST00000583030 3219 ntBASIC9.37□□□□□ -0.91
SPTSSBQ8NFR3 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC9.37□□□□□ -0.91
SPTSSBQ8NFR3 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC9.37□□□□□ -0.91
SPTSSBQ8NFR3 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC9.37□□□□□ -0.91
SPTSSBQ8NFR3 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC9.37□□□□□ -0.91
SPTSSBQ8NFR3 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC9.37□□□□□ -0.91
SPTSSBQ8NFR3 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
SPTSSBQ8NFR3 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
SPTSSBQ8NFR3 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC9.37□□□□□ -0.91
SPTSSBQ8NFR3 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
SPTSSBQ8NFR3 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
SPTSSBQ8NFR3 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
SPTSSBQ8NFR3 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC9.37□□□□□ -0.91
SPTSSBQ8NFR3 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
SPTSSBQ8NFR3 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
SPTSSBQ8NFR3 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC9.37□□□□□ -0.91
SPTSSBQ8NFR3 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
SPTSSBQ8NFR3 SH2D5-201ENST00000375031 3705 ntTSL 2 BASIC9.37□□□□□ -0.91
SPTSSBQ8NFR3 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
SPTSSBQ8NFR3 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC9.37□□□□□ -0.91
SPTSSBQ8NFR3 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
SPTSSBQ8NFR3 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
SPTSSBQ8NFR3 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
SPTSSBQ8NFR3 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
SPTSSBQ8NFR3 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC9.37□□□□□ -0.91
SPTSSBQ8NFR3 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC9.37□□□□□ -0.91
SPTSSBQ8NFR3 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
SPTSSBQ8NFR3 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC9.37□□□□□ -0.91
SPTSSBQ8NFR3 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC9.37□□□□□ -0.91
SPTSSBQ8NFR3 BRWD1-AS2-201ENST00000603064 1028 ntBASIC9.37□□□□□ -0.91
SPTSSBQ8NFR3 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC9.37□□□□□ -0.91
SPTSSBQ8NFR3 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
SPTSSBQ8NFR3 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC9.37□□□□□ -0.91
SPTSSBQ8NFR3 GREB1-201ENST00000234142 8444 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
SPTSSBQ8NFR3 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
SPTSSBQ8NFR3 CYP26B1-205ENST00000546307 4331 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
SPTSSBQ8NFR3 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
SPTSSBQ8NFR3 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
SPTSSBQ8NFR3 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
SPTSSBQ8NFR3 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
SPTSSBQ8NFR3 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC9.37□□□□□ -0.91
SPTSSBQ8NFR3 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC9.37□□□□□ -0.91
SPTSSBQ8NFR3 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC9.37□□□□□ -0.91
SPTSSBQ8NFR3 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC9.37□□□□□ -0.91
SPTSSBQ8NFR3 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
SPTSSBQ8NFR3 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC9.37□□□□□ -0.91
SPTSSBQ8NFR3 AC104417.2-201ENST00000562989 1793 ntBASIC9.37□□□□□ -0.91
SPTSSBQ8NFR3 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
SPTSSBQ8NFR3 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
SPTSSBQ8NFR3 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC9.37□□□□□ -0.91
SPTSSBQ8NFR3 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
SPTSSBQ8NFR3 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC9.37□□□□□ -0.91
SPTSSBQ8NFR3 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
SPTSSBQ8NFR3 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
SPTSSBQ8NFR3 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
SPTSSBQ8NFR3 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC9.36□□□□□ -0.91
SPTSSBQ8NFR3 ST3GAL2-202ENST00000393640 8872 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
SPTSSBQ8NFR3 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC9.36□□□□□ -0.91
SPTSSBQ8NFR3 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
SPTSSBQ8NFR3 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC9.36□□□□□ -0.91
SPTSSBQ8NFR3 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC9.36□□□□□ -0.91
SPTSSBQ8NFR3 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms