Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SIMC1Q8NDZ2 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
SIMC1Q8NDZ2 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SIMC1Q8NDZ2 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SIMC1Q8NDZ2 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SIMC1Q8NDZ2 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SIMC1Q8NDZ2 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
SIMC1Q8NDZ2 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SIMC1Q8NDZ2 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
SIMC1Q8NDZ2 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.15■□□□□ 0.18
SIMC1Q8NDZ2 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SIMC1Q8NDZ2 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SIMC1Q8NDZ2 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
SIMC1Q8NDZ2 AC097637.2-201ENST00000624096 1997 ntBASIC16.15■□□□□ 0.18
SIMC1Q8NDZ2 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.15■□□□□ 0.18
SIMC1Q8NDZ2 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SIMC1Q8NDZ2 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
SIMC1Q8NDZ2 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.14■□□□□ 0.18
SIMC1Q8NDZ2 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.14■□□□□ 0.17
SIMC1Q8NDZ2 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SIMC1Q8NDZ2 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SIMC1Q8NDZ2 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.14■□□□□ 0.17
SIMC1Q8NDZ2 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SIMC1Q8NDZ2 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.14■□□□□ 0.17
SIMC1Q8NDZ2 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SIMC1Q8NDZ2 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SIMC1Q8NDZ2 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SIMC1Q8NDZ2 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SIMC1Q8NDZ2 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
SIMC1Q8NDZ2 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SIMC1Q8NDZ2 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
SIMC1Q8NDZ2 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
SIMC1Q8NDZ2 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SIMC1Q8NDZ2 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
SIMC1Q8NDZ2 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
SIMC1Q8NDZ2 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.14■□□□□ 0.17
SIMC1Q8NDZ2 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SIMC1Q8NDZ2 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SIMC1Q8NDZ2 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
SIMC1Q8NDZ2 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SIMC1Q8NDZ2 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.14■□□□□ 0.17
SIMC1Q8NDZ2 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SIMC1Q8NDZ2 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SIMC1Q8NDZ2 PCDH8P1-201ENST00000428983 2773 ntBASIC16.14■□□□□ 0.17
SIMC1Q8NDZ2 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
SIMC1Q8NDZ2 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
SIMC1Q8NDZ2 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SIMC1Q8NDZ2 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.14■□□□□ 0.17
SIMC1Q8NDZ2 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SIMC1Q8NDZ2 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SIMC1Q8NDZ2 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SIMC1Q8NDZ2 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.13■□□□□ 0.17
SIMC1Q8NDZ2 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.13■□□□□ 0.17
SIMC1Q8NDZ2 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SIMC1Q8NDZ2 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SIMC1Q8NDZ2 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SIMC1Q8NDZ2 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
SIMC1Q8NDZ2 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.13■□□□□ 0.17
SIMC1Q8NDZ2 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.13■□□□□ 0.17
SIMC1Q8NDZ2 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.13■□□□□ 0.17
SIMC1Q8NDZ2 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SIMC1Q8NDZ2 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SIMC1Q8NDZ2 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SIMC1Q8NDZ2 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SIMC1Q8NDZ2 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SIMC1Q8NDZ2 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
SIMC1Q8NDZ2 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SIMC1Q8NDZ2 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
SIMC1Q8NDZ2 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
SIMC1Q8NDZ2 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SIMC1Q8NDZ2 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SIMC1Q8NDZ2 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SIMC1Q8NDZ2 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SIMC1Q8NDZ2 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SIMC1Q8NDZ2 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.13■□□□□ 0.17
SIMC1Q8NDZ2 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SIMC1Q8NDZ2 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SIMC1Q8NDZ2 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SIMC1Q8NDZ2 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SIMC1Q8NDZ2 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SIMC1Q8NDZ2 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.12■□□□□ 0.17
SIMC1Q8NDZ2 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SIMC1Q8NDZ2 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.12■□□□□ 0.17
SIMC1Q8NDZ2 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.12■□□□□ 0.17
SIMC1Q8NDZ2 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SIMC1Q8NDZ2 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SIMC1Q8NDZ2 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SIMC1Q8NDZ2 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SIMC1Q8NDZ2 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SIMC1Q8NDZ2 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SIMC1Q8NDZ2 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.12■□□□□ 0.17
SIMC1Q8NDZ2 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SIMC1Q8NDZ2 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.12■□□□□ 0.17
SIMC1Q8NDZ2 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
SIMC1Q8NDZ2 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC16.12■□□□□ 0.17
SIMC1Q8NDZ2 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.12■□□□□ 0.17
SIMC1Q8NDZ2 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.12■□□□□ 0.17
SIMC1Q8NDZ2 AC021087.4-201ENST00000563761 564 ntBASIC16.12■□□□□ 0.17
SIMC1Q8NDZ2 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
SIMC1Q8NDZ2 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms