Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RTL3Q8N8U3 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RTL3Q8N8U3 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
RTL3Q8N8U3 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RTL3Q8N8U3 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
RTL3Q8N8U3 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.49■□□□□ 0.39
RTL3Q8N8U3 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RTL3Q8N8U3 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RTL3Q8N8U3 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
RTL3Q8N8U3 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.49■□□□□ 0.39
RTL3Q8N8U3 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.49■□□□□ 0.39
RTL3Q8N8U3 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
RTL3Q8N8U3 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.48■□□□□ 0.39
RTL3Q8N8U3 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RTL3Q8N8U3 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RTL3Q8N8U3 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RTL3Q8N8U3 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
RTL3Q8N8U3 TUBB8P12-201ENST00000308911 1335 ntBASIC17.48■□□□□ 0.39
RTL3Q8N8U3 TUBB7P-202ENST00000428444 1305 ntBASIC17.48■□□□□ 0.39
RTL3Q8N8U3 TUBB8P7-204ENST00000567960 1332 ntBASIC17.48■□□□□ 0.39
RTL3Q8N8U3 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
RTL3Q8N8U3 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.48■□□□□ 0.39
RTL3Q8N8U3 AC104109.2-201ENST00000602919 1418 ntBASIC17.48■□□□□ 0.39
RTL3Q8N8U3 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RTL3Q8N8U3 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RTL3Q8N8U3 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.48■□□□□ 0.39
RTL3Q8N8U3 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RTL3Q8N8U3 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RTL3Q8N8U3 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RTL3Q8N8U3 AL121761.2-201ENST00000598007 1648 ntBASIC17.48■□□□□ 0.39
RTL3Q8N8U3 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RTL3Q8N8U3 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RTL3Q8N8U3 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RTL3Q8N8U3 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RTL3Q8N8U3 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RTL3Q8N8U3 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RTL3Q8N8U3 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.48■□□□□ 0.39
RTL3Q8N8U3 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
RTL3Q8N8U3 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.48■□□□□ 0.39
RTL3Q8N8U3 RPL13AP23-201ENST00000480739 586 ntBASIC17.48■□□□□ 0.39
RTL3Q8N8U3 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.48■□□□□ 0.39
RTL3Q8N8U3 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
RTL3Q8N8U3 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RTL3Q8N8U3 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
RTL3Q8N8U3 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RTL3Q8N8U3 AC010654.1-201ENST00000615722 808 ntBASIC17.48■□□□□ 0.39
RTL3Q8N8U3 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.48■□□□□ 0.39
RTL3Q8N8U3 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RTL3Q8N8U3 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RTL3Q8N8U3 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RTL3Q8N8U3 AL021920.2-201ENST00000624828 1351 ntBASIC17.48■□□□□ 0.39
RTL3Q8N8U3 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.48■□□□□ 0.39
RTL3Q8N8U3 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RTL3Q8N8U3 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RTL3Q8N8U3 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
RTL3Q8N8U3 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RTL3Q8N8U3 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.48■□□□□ 0.39
RTL3Q8N8U3 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RTL3Q8N8U3 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RTL3Q8N8U3 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
RTL3Q8N8U3 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
RTL3Q8N8U3 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
RTL3Q8N8U3 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RTL3Q8N8U3 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RTL3Q8N8U3 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RTL3Q8N8U3 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.47■□□□□ 0.39
RTL3Q8N8U3 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RTL3Q8N8U3 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RTL3Q8N8U3 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RTL3Q8N8U3 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
RTL3Q8N8U3 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
RTL3Q8N8U3 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.47■□□□□ 0.39
RTL3Q8N8U3 TEX30-205ENST00000376029 959 ntTSL 2 BASIC17.47■□□□□ 0.39
RTL3Q8N8U3 METTL26-205ENST00000397666 726 ntTSL 2 BASIC17.47■□□□□ 0.39
RTL3Q8N8U3 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC17.47■□□□□ 0.39
RTL3Q8N8U3 SLC25A1P1-201ENST00000528351 927 ntBASIC17.47■□□□□ 0.39
RTL3Q8N8U3 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.47■□□□□ 0.39
RTL3Q8N8U3 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.47■□□□□ 0.39
RTL3Q8N8U3 MIR4751-201ENST00000578027 74 ntBASIC17.47■□□□□ 0.39
RTL3Q8N8U3 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.47■□□□□ 0.39
RTL3Q8N8U3 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
RTL3Q8N8U3 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.47■□□□□ 0.39
RTL3Q8N8U3 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.47■□□□□ 0.39
RTL3Q8N8U3 REXO1L3P-201ENST00000622202 1288 ntBASIC17.47■□□□□ 0.39
RTL3Q8N8U3 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RTL3Q8N8U3 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.47■□□□□ 0.39
RTL3Q8N8U3 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RTL3Q8N8U3 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.47■□□□□ 0.39
RTL3Q8N8U3 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
RTL3Q8N8U3 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RTL3Q8N8U3 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RTL3Q8N8U3 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RTL3Q8N8U3 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.47■□□□□ 0.39
RTL3Q8N8U3 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.47■□□□□ 0.39
RTL3Q8N8U3 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RTL3Q8N8U3 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
RTL3Q8N8U3 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.46■□□□□ 0.39
RTL3Q8N8U3 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RTL3Q8N8U3 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
RTL3Q8N8U3 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms