Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 AC092902.6-201ENST00000641783 218 ntBASIC17.38■□□□□ 0.37
CHPFQ8IZ52 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CHPFQ8IZ52 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHPFQ8IZ52 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHPFQ8IZ52 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CHPFQ8IZ52 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CHPFQ8IZ52 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.37■□□□□ 0.37
CHPFQ8IZ52 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHPFQ8IZ52 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CHPFQ8IZ52 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
CHPFQ8IZ52 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHPFQ8IZ52 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.37■□□□□ 0.37
CHPFQ8IZ52 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHPFQ8IZ52 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CHPFQ8IZ52 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHPFQ8IZ52 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CHPFQ8IZ52 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CHPFQ8IZ52 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHPFQ8IZ52 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CHPFQ8IZ52 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CHPFQ8IZ52 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC17.37■□□□□ 0.37
CHPFQ8IZ52 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.37■□□□□ 0.37
CHPFQ8IZ52 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.37■□□□□ 0.37
CHPFQ8IZ52 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC17.37■□□□□ 0.37
CHPFQ8IZ52 RFPL4AP1-201ENST00000530883 850 ntBASIC17.37■□□□□ 0.37
CHPFQ8IZ52 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC17.37■□□□□ 0.37
CHPFQ8IZ52 AC134043.2-201ENST00000624206 2238 ntBASIC17.37■□□□□ 0.37
CHPFQ8IZ52 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.37■□□□□ 0.37
CHPFQ8IZ52 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHPFQ8IZ52 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHPFQ8IZ52 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHPFQ8IZ52 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
CHPFQ8IZ52 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CHPFQ8IZ52 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.37■□□□□ 0.37
CHPFQ8IZ52 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC17.37■□□□□ 0.37
CHPFQ8IZ52 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHPFQ8IZ52 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.37■□□□□ 0.37
CHPFQ8IZ52 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
CHPFQ8IZ52 AC006116.8-202ENST00000587620 1550 ntBASIC17.36■□□□□ 0.37
CHPFQ8IZ52 AC092919.2-201ENST00000623631 1645 ntBASIC17.36■□□□□ 0.37
CHPFQ8IZ52 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.36■□□□□ 0.37
CHPFQ8IZ52 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.36■□□□□ 0.37
CHPFQ8IZ52 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHPFQ8IZ52 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHPFQ8IZ52 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CHPFQ8IZ52 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHPFQ8IZ52 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
CHPFQ8IZ52 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHPFQ8IZ52 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
CHPFQ8IZ52 CYMP-203ENST00000474680 1263 ntBASIC17.36■□□□□ 0.37
CHPFQ8IZ52 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.36■□□□□ 0.37
CHPFQ8IZ52 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.36■□□□□ 0.37
CHPFQ8IZ52 AC112191.1-201ENST00000523689 701 ntBASIC17.36■□□□□ 0.37
CHPFQ8IZ52 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC17.36■□□□□ 0.37
CHPFQ8IZ52 AC004835.2-201ENST00000603762 682 ntBASIC17.36■□□□□ 0.37
CHPFQ8IZ52 AC027612.4-201ENST00000605371 583 ntBASIC17.36■□□□□ 0.37
CHPFQ8IZ52 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CHPFQ8IZ52 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CHPFQ8IZ52 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHPFQ8IZ52 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.36■□□□□ 0.37
CHPFQ8IZ52 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC17.36■□□□□ 0.37
CHPFQ8IZ52 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CHPFQ8IZ52 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CHPFQ8IZ52 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CHPFQ8IZ52 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
CHPFQ8IZ52 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.36■□□□□ 0.37
CHPFQ8IZ52 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.36■□□□□ 0.37
CHPFQ8IZ52 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
CHPFQ8IZ52 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CHPFQ8IZ52 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
CHPFQ8IZ52 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHPFQ8IZ52 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHPFQ8IZ52 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHPFQ8IZ52 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CHPFQ8IZ52 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.35■□□□□ 0.37
CHPFQ8IZ52 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHPFQ8IZ52 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.35■□□□□ 0.37
CHPFQ8IZ52 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHPFQ8IZ52 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.35■□□□□ 0.37
CHPFQ8IZ52 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHPFQ8IZ52 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHPFQ8IZ52 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CHPFQ8IZ52 AL355312.1-201ENST00000407115 2176 ntBASIC17.35■□□□□ 0.37
CHPFQ8IZ52 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CHPFQ8IZ52 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CHPFQ8IZ52 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHPFQ8IZ52 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CHPFQ8IZ52 PNMT-202ENST00000394246 821 ntTSL 2 BASIC17.35■□□□□ 0.37
CHPFQ8IZ52 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.35■□□□□ 0.37
CHPFQ8IZ52 AL645939.2-201ENST00000427340 991 ntBASIC17.35■□□□□ 0.37
CHPFQ8IZ52 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CHPFQ8IZ52 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC17.35■□□□□ 0.37
CHPFQ8IZ52 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC17.35■□□□□ 0.37
CHPFQ8IZ52 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CHPFQ8IZ52 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC17.35■□□□□ 0.37
CHPFQ8IZ52 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.35■□□□□ 0.37
CHPFQ8IZ52 REXO1L3P-201ENST00000622202 1288 ntBASIC17.35■□□□□ 0.37
CHPFQ8IZ52 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CHPFQ8IZ52 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHPFQ8IZ52 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms