Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC17.6■□□□□ 0.41
NPAS3Q8IXF0 TAF8-206ENST00000472818 719 ntTSL 2 BASIC17.6■□□□□ 0.41
NPAS3Q8IXF0 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC17.6■□□□□ 0.41
NPAS3Q8IXF0 KRT8P23-201ENST00000560090 1207 ntBASIC17.6■□□□□ 0.41
NPAS3Q8IXF0 AC026150.2-201ENST00000564693 1156 ntBASIC17.6■□□□□ 0.41
NPAS3Q8IXF0 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
NPAS3Q8IXF0 NAA60-208ENST00000570819 833 ntTSL 2 BASIC17.6■□□□□ 0.41
NPAS3Q8IXF0 PRR29-209ENST00000582540 967 ntTSL 2 BASIC17.6■□□□□ 0.41
NPAS3Q8IXF0 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC17.6■□□□□ 0.41
NPAS3Q8IXF0 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NPAS3Q8IXF0 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NPAS3Q8IXF0 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC17.6■□□□□ 0.41
NPAS3Q8IXF0 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
NPAS3Q8IXF0 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NPAS3Q8IXF0 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
NPAS3Q8IXF0 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NPAS3Q8IXF0 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC17.6■□□□□ 0.41
NPAS3Q8IXF0 UXT-AS1-201ENST00000590504 1525 ntBASIC17.6■□□□□ 0.41
NPAS3Q8IXF0 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
NPAS3Q8IXF0 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NPAS3Q8IXF0 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NPAS3Q8IXF0 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NPAS3Q8IXF0 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
NPAS3Q8IXF0 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
NPAS3Q8IXF0 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.6■□□□□ 0.41
NPAS3Q8IXF0 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.6■□□□□ 0.41
NPAS3Q8IXF0 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
NPAS3Q8IXF0 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
NPAS3Q8IXF0 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NPAS3Q8IXF0 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
NPAS3Q8IXF0 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NPAS3Q8IXF0 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
NPAS3Q8IXF0 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NPAS3Q8IXF0 AL133373.2-201ENST00000623187 2828 ntBASIC17.59■□□□□ 0.41
NPAS3Q8IXF0 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.59■□□□□ 0.41
NPAS3Q8IXF0 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NPAS3Q8IXF0 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NPAS3Q8IXF0 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
NPAS3Q8IXF0 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NPAS3Q8IXF0 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
NPAS3Q8IXF0 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NPAS3Q8IXF0 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NPAS3Q8IXF0 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.59■□□□□ 0.41
NPAS3Q8IXF0 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
NPAS3Q8IXF0 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NPAS3Q8IXF0 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NPAS3Q8IXF0 AL353732.1-201ENST00000569618 1459 ntBASIC17.59■□□□□ 0.41
NPAS3Q8IXF0 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NPAS3Q8IXF0 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NPAS3Q8IXF0 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NPAS3Q8IXF0 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NPAS3Q8IXF0 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC17.59■□□□□ 0.41
NPAS3Q8IXF0 WRB-204ENST00000398753 699 ntTSL 3 BASIC17.59■□□□□ 0.41
NPAS3Q8IXF0 SPDYE14P-201ENST00000442619 822 ntBASIC17.59■□□□□ 0.41
NPAS3Q8IXF0 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NPAS3Q8IXF0 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC17.59■□□□□ 0.41
NPAS3Q8IXF0 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC17.59■□□□□ 0.41
NPAS3Q8IXF0 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
NPAS3Q8IXF0 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC17.59■□□□□ 0.41
NPAS3Q8IXF0 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC17.59■□□□□ 0.41
NPAS3Q8IXF0 AC084121.4-201ENST00000641598 221 ntBASIC17.59■□□□□ 0.41
NPAS3Q8IXF0 AF228730.8-201ENST00000642140 221 ntBASIC17.59■□□□□ 0.41
NPAS3Q8IXF0 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NPAS3Q8IXF0 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NPAS3Q8IXF0 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NPAS3Q8IXF0 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NPAS3Q8IXF0 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NPAS3Q8IXF0 AC026471.1-201ENST00000564629 3026 ntBASIC17.58■□□□□ 0.41
NPAS3Q8IXF0 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
NPAS3Q8IXF0 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.41
NPAS3Q8IXF0 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.58■□□□□ 0.41
NPAS3Q8IXF0 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.58■□□□□ 0.41
NPAS3Q8IXF0 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
NPAS3Q8IXF0 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.58■□□□□ 0.41
NPAS3Q8IXF0 AC008677.1-201ENST00000519230 1561 ntBASIC17.58■□□□□ 0.41
NPAS3Q8IXF0 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
NPAS3Q8IXF0 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
NPAS3Q8IXF0 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
NPAS3Q8IXF0 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.58■□□□□ 0.41
NPAS3Q8IXF0 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
NPAS3Q8IXF0 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.58■□□□□ 0.4
NPAS3Q8IXF0 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
NPAS3Q8IXF0 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
NPAS3Q8IXF0 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NPAS3Q8IXF0 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC17.58■□□□□ 0.4
NPAS3Q8IXF0 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC17.58■□□□□ 0.4
NPAS3Q8IXF0 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC17.58■□□□□ 0.4
NPAS3Q8IXF0 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.58■□□□□ 0.4
NPAS3Q8IXF0 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NPAS3Q8IXF0 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.58■□□□□ 0.4
NPAS3Q8IXF0 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC17.58■□□□□ 0.4
NPAS3Q8IXF0 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
NPAS3Q8IXF0 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
NPAS3Q8IXF0 AC190387.1-201ENST00000551683 408 ntBASIC17.58■□□□□ 0.4
NPAS3Q8IXF0 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
NPAS3Q8IXF0 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.58■□□□□ 0.4
NPAS3Q8IXF0 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NPAS3Q8IXF0 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC17.58■□□□□ 0.4
NPAS3Q8IXF0 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.58■□□□□ 0.4
NPAS3Q8IXF0 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms