Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.1■□□□□ 0.33
TRIM42Q8IWZ5 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM42Q8IWZ5 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM42Q8IWZ5 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
TRIM42Q8IWZ5 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM42Q8IWZ5 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC17.1■□□□□ 0.33
TRIM42Q8IWZ5 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.1■□□□□ 0.33
TRIM42Q8IWZ5 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM42Q8IWZ5 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM42Q8IWZ5 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM42Q8IWZ5 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM42Q8IWZ5 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM42Q8IWZ5 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.1■□□□□ 0.33
TRIM42Q8IWZ5 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM42Q8IWZ5 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM42Q8IWZ5 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM42Q8IWZ5 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM42Q8IWZ5 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM42Q8IWZ5 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM42Q8IWZ5 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM42Q8IWZ5 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM42Q8IWZ5 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM42Q8IWZ5 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM42Q8IWZ5 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM42Q8IWZ5 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.09■□□□□ 0.33
TRIM42Q8IWZ5 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
TRIM42Q8IWZ5 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM42Q8IWZ5 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM42Q8IWZ5 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.09■□□□□ 0.33
TRIM42Q8IWZ5 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
TRIM42Q8IWZ5 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM42Q8IWZ5 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM42Q8IWZ5 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
TRIM42Q8IWZ5 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
TRIM42Q8IWZ5 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM42Q8IWZ5 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.09■□□□□ 0.33
TRIM42Q8IWZ5 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.09■□□□□ 0.33
TRIM42Q8IWZ5 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.09■□□□□ 0.33
TRIM42Q8IWZ5 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.09■□□□□ 0.33
TRIM42Q8IWZ5 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.09■□□□□ 0.33
TRIM42Q8IWZ5 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.09■□□□□ 0.33
TRIM42Q8IWZ5 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM42Q8IWZ5 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM42Q8IWZ5 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM42Q8IWZ5 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM42Q8IWZ5 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
TRIM42Q8IWZ5 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
TRIM42Q8IWZ5 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM42Q8IWZ5 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM42Q8IWZ5 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.09■□□□□ 0.33
TRIM42Q8IWZ5 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM42Q8IWZ5 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM42Q8IWZ5 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM42Q8IWZ5 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC17.09■□□□□ 0.33
TRIM42Q8IWZ5 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
TRIM42Q8IWZ5 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRIM42Q8IWZ5 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC17.08■□□□□ 0.33
TRIM42Q8IWZ5 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.33
TRIM42Q8IWZ5 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRIM42Q8IWZ5 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TRIM42Q8IWZ5 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRIM42Q8IWZ5 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.08■□□□□ 0.33
TRIM42Q8IWZ5 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TRIM42Q8IWZ5 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
TRIM42Q8IWZ5 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM42Q8IWZ5 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM42Q8IWZ5 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM42Q8IWZ5 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
TRIM42Q8IWZ5 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.08■□□□□ 0.32
TRIM42Q8IWZ5 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM42Q8IWZ5 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
TRIM42Q8IWZ5 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM42Q8IWZ5 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM42Q8IWZ5 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.08■□□□□ 0.32
TRIM42Q8IWZ5 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.08■□□□□ 0.32
TRIM42Q8IWZ5 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.08■□□□□ 0.32
TRIM42Q8IWZ5 AC068472.1-201ENST00000474589 881 ntBASIC17.08■□□□□ 0.32
TRIM42Q8IWZ5 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.08■□□□□ 0.32
TRIM42Q8IWZ5 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.08■□□□□ 0.32
TRIM42Q8IWZ5 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM42Q8IWZ5 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM42Q8IWZ5 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM42Q8IWZ5 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM42Q8IWZ5 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.08■□□□□ 0.32
TRIM42Q8IWZ5 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
TRIM42Q8IWZ5 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM42Q8IWZ5 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM42Q8IWZ5 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
TRIM42Q8IWZ5 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM42Q8IWZ5 AC008741.2-201ENST00000612792 3115 ntBASIC17.07■□□□□ 0.32
TRIM42Q8IWZ5 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.07■□□□□ 0.32
TRIM42Q8IWZ5 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM42Q8IWZ5 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
TRIM42Q8IWZ5 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM42Q8IWZ5 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM42Q8IWZ5 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM42Q8IWZ5 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.07■□□□□ 0.32
TRIM42Q8IWZ5 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM42Q8IWZ5 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM42Q8IWZ5 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms