Protein–RNA interactions for Protein: Q7RTM1

OTOP1, Otopetrin-1, humanhuman

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTOP1Q7RTM1 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
OTOP1Q7RTM1 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
OTOP1Q7RTM1 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
OTOP1Q7RTM1 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
OTOP1Q7RTM1 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
OTOP1Q7RTM1 MRPS18AP1-201ENST00000414458 589 ntBASIC19.67■□□□□ 0.74
OTOP1Q7RTM1 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC19.67■□□□□ 0.74
OTOP1Q7RTM1 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC19.67■□□□□ 0.74
OTOP1Q7RTM1 PPP6R2P1-201ENST00000450880 1275 ntBASIC19.67■□□□□ 0.74
OTOP1Q7RTM1 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC19.67■□□□□ 0.74
OTOP1Q7RTM1 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
OTOP1Q7RTM1 IGHV3-71-201ENST00000523324 359 ntBASIC19.67■□□□□ 0.74
OTOP1Q7RTM1 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC19.67■□□□□ 0.74
OTOP1Q7RTM1 AL139327.4-201ENST00000612362 153 ntBASIC19.67■□□□□ 0.74
OTOP1Q7RTM1 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
OTOP1Q7RTM1 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
OTOP1Q7RTM1 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
OTOP1Q7RTM1 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
OTOP1Q7RTM1 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC19.67■□□□□ 0.74
OTOP1Q7RTM1 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
OTOP1Q7RTM1 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
OTOP1Q7RTM1 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
OTOP1Q7RTM1 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.66■□□□□ 0.74
OTOP1Q7RTM1 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC19.66■□□□□ 0.74
OTOP1Q7RTM1 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
OTOP1Q7RTM1 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
OTOP1Q7RTM1 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
OTOP1Q7RTM1 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC19.66■□□□□ 0.74
OTOP1Q7RTM1 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
OTOP1Q7RTM1 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
OTOP1Q7RTM1 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
OTOP1Q7RTM1 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
OTOP1Q7RTM1 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC19.66■□□□□ 0.74
OTOP1Q7RTM1 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC19.66■□□□□ 0.74
OTOP1Q7RTM1 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC19.66■□□□□ 0.74
OTOP1Q7RTM1 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC19.66■□□□□ 0.74
OTOP1Q7RTM1 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC19.66■□□□□ 0.74
OTOP1Q7RTM1 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.66■□□□□ 0.74
OTOP1Q7RTM1 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
OTOP1Q7RTM1 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
OTOP1Q7RTM1 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
OTOP1Q7RTM1 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC19.66■□□□□ 0.74
OTOP1Q7RTM1 CU639417.3-201ENST00000624240 1404 ntBASIC19.66■□□□□ 0.74
OTOP1Q7RTM1 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC19.66■□□□□ 0.74
OTOP1Q7RTM1 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
OTOP1Q7RTM1 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
OTOP1Q7RTM1 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
OTOP1Q7RTM1 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.66■□□□□ 0.74
OTOP1Q7RTM1 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC19.66■□□□□ 0.74
OTOP1Q7RTM1 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
OTOP1Q7RTM1 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC19.66■□□□□ 0.74
OTOP1Q7RTM1 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
OTOP1Q7RTM1 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
OTOP1Q7RTM1 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC19.65■□□□□ 0.74
OTOP1Q7RTM1 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
OTOP1Q7RTM1 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC19.65■□□□□ 0.74
OTOP1Q7RTM1 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
OTOP1Q7RTM1 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
OTOP1Q7RTM1 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
OTOP1Q7RTM1 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC19.65■□□□□ 0.74
OTOP1Q7RTM1 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
OTOP1Q7RTM1 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
OTOP1Q7RTM1 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC19.65■□□□□ 0.74
OTOP1Q7RTM1 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC19.65■□□□□ 0.74
OTOP1Q7RTM1 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
OTOP1Q7RTM1 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
OTOP1Q7RTM1 LYSMD4-203ENST00000378904 2122 ntBASIC19.65■□□□□ 0.74
OTOP1Q7RTM1 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC19.65■□□□□ 0.74
OTOP1Q7RTM1 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC19.65■□□□□ 0.74
OTOP1Q7RTM1 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC19.65■□□□□ 0.74
OTOP1Q7RTM1 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC19.65■□□□□ 0.74
OTOP1Q7RTM1 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC19.65■□□□□ 0.74
OTOP1Q7RTM1 IGHV3-62-201ENST00000520057 340 ntBASIC19.65■□□□□ 0.74
OTOP1Q7RTM1 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC19.65■□□□□ 0.74
OTOP1Q7RTM1 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC19.65■□□□□ 0.74
OTOP1Q7RTM1 LINC01225-203ENST00000563550 1244 ntBASIC19.65■□□□□ 0.74
OTOP1Q7RTM1 AC009118.2-201ENST00000613275 655 ntBASIC19.65■□□□□ 0.74
OTOP1Q7RTM1 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
OTOP1Q7RTM1 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC19.65■□□□□ 0.74
OTOP1Q7RTM1 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
OTOP1Q7RTM1 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC19.65■□□□□ 0.74
OTOP1Q7RTM1 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
OTOP1Q7RTM1 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC19.65■□□□□ 0.74
OTOP1Q7RTM1 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
OTOP1Q7RTM1 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
OTOP1Q7RTM1 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
OTOP1Q7RTM1 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC19.65■□□□□ 0.74
OTOP1Q7RTM1 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC19.65■□□□□ 0.74
OTOP1Q7RTM1 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
OTOP1Q7RTM1 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
OTOP1Q7RTM1 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC19.64■□□□□ 0.74
OTOP1Q7RTM1 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
OTOP1Q7RTM1 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC19.64■□□□□ 0.74
OTOP1Q7RTM1 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
OTOP1Q7RTM1 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
OTOP1Q7RTM1 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
OTOP1Q7RTM1 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
OTOP1Q7RTM1 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
OTOP1Q7RTM1 ACTG1P4-201ENST00000425123 1122 ntBASIC19.64■□□□□ 0.73
OTOP1Q7RTM1 GPR53P-205ENST00000457298 1084 ntBASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms