Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TUBA1AQ71U36 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TUBA1AQ71U36 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
TUBA1AQ71U36 LINC00167-201ENST00000530583 1419 ntBASIC15.82■□□□□ 0.12
TUBA1AQ71U36 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
TUBA1AQ71U36 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TUBA1AQ71U36 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
TUBA1AQ71U36 AC116353.5-201ENST00000638148 1699 ntBASIC15.82■□□□□ 0.12
TUBA1AQ71U36 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TUBA1AQ71U36 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
TUBA1AQ71U36 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TUBA1AQ71U36 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TUBA1AQ71U36 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TUBA1AQ71U36 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.82■□□□□ 0.12
TUBA1AQ71U36 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
TUBA1AQ71U36 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.81■□□□□ 0.12
TUBA1AQ71U36 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TUBA1AQ71U36 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
TUBA1AQ71U36 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
TUBA1AQ71U36 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
TUBA1AQ71U36 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TUBA1AQ71U36 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC15.81■□□□□ 0.12
TUBA1AQ71U36 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TUBA1AQ71U36 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TUBA1AQ71U36 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TUBA1AQ71U36 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.81■□□□□ 0.12
TUBA1AQ71U36 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
TUBA1AQ71U36 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TUBA1AQ71U36 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TUBA1AQ71U36 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TUBA1AQ71U36 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TUBA1AQ71U36 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC15.81■□□□□ 0.12
TUBA1AQ71U36 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC15.81■□□□□ 0.12
TUBA1AQ71U36 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
TUBA1AQ71U36 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.81■□□□□ 0.12
TUBA1AQ71U36 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TUBA1AQ71U36 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TUBA1AQ71U36 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC15.81■□□□□ 0.12
TUBA1AQ71U36 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC15.81■□□□□ 0.12
TUBA1AQ71U36 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC15.81■□□□□ 0.12
TUBA1AQ71U36 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC15.81■□□□□ 0.12
TUBA1AQ71U36 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TUBA1AQ71U36 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC15.81■□□□□ 0.12
TUBA1AQ71U36 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC15.81■□□□□ 0.12
TUBA1AQ71U36 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
TUBA1AQ71U36 METTL23-204ENST00000586752 904 ntTSL 2 BASIC15.81■□□□□ 0.12
TUBA1AQ71U36 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TUBA1AQ71U36 AC008687.5-201ENST00000593746 558 ntBASIC15.81■□□□□ 0.12
TUBA1AQ71U36 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC15.81■□□□□ 0.12
TUBA1AQ71U36 AC132938.6-201ENST00000623828 1655 ntBASIC15.81■□□□□ 0.12
TUBA1AQ71U36 VPS72-207ENST00000640458 689 ntTSL 5 BASIC15.81■□□□□ 0.12
TUBA1AQ71U36 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TUBA1AQ71U36 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TUBA1AQ71U36 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
TUBA1AQ71U36 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TUBA1AQ71U36 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.81■□□□□ 0.12
TUBA1AQ71U36 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TUBA1AQ71U36 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TUBA1AQ71U36 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TUBA1AQ71U36 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TUBA1AQ71U36 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TUBA1AQ71U36 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.8■□□□□ 0.12
TUBA1AQ71U36 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
TUBA1AQ71U36 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC15.8■□□□□ 0.12
TUBA1AQ71U36 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TUBA1AQ71U36 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TUBA1AQ71U36 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TUBA1AQ71U36 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TUBA1AQ71U36 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TUBA1AQ71U36 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
TUBA1AQ71U36 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
TUBA1AQ71U36 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TUBA1AQ71U36 KRT18P1-202ENST00000452408 1331 ntBASIC15.8■□□□□ 0.12
TUBA1AQ71U36 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TUBA1AQ71U36 TSPY12P-201ENST00000421279 868 ntBASIC15.8■□□□□ 0.12
TUBA1AQ71U36 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC15.8■□□□□ 0.12
TUBA1AQ71U36 CHCHD2P8-201ENST00000429873 447 ntBASIC15.8■□□□□ 0.12
TUBA1AQ71U36 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC15.8■□□□□ 0.12
TUBA1AQ71U36 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC15.8■□□□□ 0.12
TUBA1AQ71U36 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
TUBA1AQ71U36 IGHV3-41-201ENST00000613121 348 ntBASIC15.8■□□□□ 0.12
TUBA1AQ71U36 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC15.8■□□□□ 0.12
TUBA1AQ71U36 AC124864.1-201ENST00000623408 392 ntBASIC15.8■□□□□ 0.12
TUBA1AQ71U36 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TUBA1AQ71U36 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC15.8■□□□□ 0.12
TUBA1AQ71U36 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC15.8■□□□□ 0.12
TUBA1AQ71U36 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
TUBA1AQ71U36 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.8■□□□□ 0.12
TUBA1AQ71U36 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TUBA1AQ71U36 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TUBA1AQ71U36 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TUBA1AQ71U36 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TUBA1AQ71U36 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TUBA1AQ71U36 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.8■□□□□ 0.12
TUBA1AQ71U36 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TUBA1AQ71U36 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.8■□□□□ 0.12
TUBA1AQ71U36 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC15.8■□□□□ 0.12
TUBA1AQ71U36 AC100803.2-201ENST00000562459 1963 ntBASIC15.8■□□□□ 0.12
TUBA1AQ71U36 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
TUBA1AQ71U36 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms