Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.77■□□□□ 0.12
PTCHD4Q6ZW05 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PTCHD4Q6ZW05 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC15.77■□□□□ 0.12
PTCHD4Q6ZW05 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
PTCHD4Q6ZW05 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PTCHD4Q6ZW05 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC15.77■□□□□ 0.12
PTCHD4Q6ZW05 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PTCHD4Q6ZW05 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PTCHD4Q6ZW05 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PTCHD4Q6ZW05 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.12
PTCHD4Q6ZW05 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PTCHD4Q6ZW05 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PTCHD4Q6ZW05 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PTCHD4Q6ZW05 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
PTCHD4Q6ZW05 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.77■□□□□ 0.12
PTCHD4Q6ZW05 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PTCHD4Q6ZW05 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PTCHD4Q6ZW05 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
PTCHD4Q6ZW05 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PTCHD4Q6ZW05 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
PTCHD4Q6ZW05 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC15.77■□□□□ 0.12
PTCHD4Q6ZW05 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC15.77■□□□□ 0.12
PTCHD4Q6ZW05 PPOX-219ENST00000544598 813 ntTSL 2 BASIC15.77■□□□□ 0.12
PTCHD4Q6ZW05 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC15.77■□□□□ 0.12
PTCHD4Q6ZW05 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
PTCHD4Q6ZW05 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC15.77■□□□□ 0.12
PTCHD4Q6ZW05 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC15.77■□□□□ 0.12
PTCHD4Q6ZW05 AC083849.1-201ENST00000615227 514 ntBASIC15.77■□□□□ 0.12
PTCHD4Q6ZW05 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
PTCHD4Q6ZW05 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
PTCHD4Q6ZW05 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PTCHD4Q6ZW05 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PTCHD4Q6ZW05 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
PTCHD4Q6ZW05 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.77■□□□□ 0.11
PTCHD4Q6ZW05 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
PTCHD4Q6ZW05 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.77■□□□□ 0.11
PTCHD4Q6ZW05 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.77■□□□□ 0.11
PTCHD4Q6ZW05 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
PTCHD4Q6ZW05 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
PTCHD4Q6ZW05 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
PTCHD4Q6ZW05 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PTCHD4Q6ZW05 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PTCHD4Q6ZW05 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC15.77■□□□□ 0.11
PTCHD4Q6ZW05 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.11
PTCHD4Q6ZW05 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
PTCHD4Q6ZW05 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PTCHD4Q6ZW05 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PTCHD4Q6ZW05 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.77■□□□□ 0.11
PTCHD4Q6ZW05 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
PTCHD4Q6ZW05 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PTCHD4Q6ZW05 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
PTCHD4Q6ZW05 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
PTCHD4Q6ZW05 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PTCHD4Q6ZW05 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
PTCHD4Q6ZW05 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
PTCHD4Q6ZW05 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
PTCHD4Q6ZW05 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
PTCHD4Q6ZW05 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PTCHD4Q6ZW05 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.76■□□□□ 0.11
PTCHD4Q6ZW05 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.76■□□□□ 0.11
PTCHD4Q6ZW05 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
PTCHD4Q6ZW05 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PTCHD4Q6ZW05 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
PTCHD4Q6ZW05 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.76■□□□□ 0.11
PTCHD4Q6ZW05 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.76■□□□□ 0.11
PTCHD4Q6ZW05 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PTCHD4Q6ZW05 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC15.76■□□□□ 0.11
PTCHD4Q6ZW05 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PTCHD4Q6ZW05 AC096633.1-201ENST00000422446 749 ntBASIC15.76■□□□□ 0.11
PTCHD4Q6ZW05 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC15.76■□□□□ 0.11
PTCHD4Q6ZW05 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC15.76■□□□□ 0.11
PTCHD4Q6ZW05 AC092647.4-201ENST00000457211 535 ntBASIC15.76■□□□□ 0.11
PTCHD4Q6ZW05 LY6E-213ENST00000522528 606 ntTSL 3 BASIC15.76■□□□□ 0.11
PTCHD4Q6ZW05 AC124947.2-201ENST00000547118 1133 ntBASIC15.76■□□□□ 0.11
PTCHD4Q6ZW05 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC15.76■□□□□ 0.11
PTCHD4Q6ZW05 LINC01023-201ENST00000606054 436 ntBASIC15.76■□□□□ 0.11
PTCHD4Q6ZW05 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PTCHD4Q6ZW05 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
PTCHD4Q6ZW05 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PTCHD4Q6ZW05 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PTCHD4Q6ZW05 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.76■□□□□ 0.11
PTCHD4Q6ZW05 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.76■□□□□ 0.11
PTCHD4Q6ZW05 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PTCHD4Q6ZW05 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PTCHD4Q6ZW05 AC011270.2-201ENST00000624293 2550 ntBASIC15.76■□□□□ 0.11
PTCHD4Q6ZW05 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PTCHD4Q6ZW05 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC15.76■□□□□ 0.11
PTCHD4Q6ZW05 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
PTCHD4Q6ZW05 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PTCHD4Q6ZW05 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PTCHD4Q6ZW05 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC15.75■□□□□ 0.11
PTCHD4Q6ZW05 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PTCHD4Q6ZW05 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.75■□□□□ 0.11
PTCHD4Q6ZW05 UBC-206ENST00000538617 1303 ntTSL 5 BASIC15.75■□□□□ 0.11
PTCHD4Q6ZW05 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
PTCHD4Q6ZW05 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PTCHD4Q6ZW05 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
PTCHD4Q6ZW05 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PTCHD4Q6ZW05 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
PTCHD4Q6ZW05 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms