Protein–RNA interactions for Protein: Q5VTA0

PRAMEF17, PRAME family member 17, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF17Q5VTA0 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.28■□□□□ 0.2
PRAMEF17Q5VTA0 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEF17Q5VTA0 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEF17Q5VTA0 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.28■□□□□ 0.2
PRAMEF17Q5VTA0 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.28■□□□□ 0.2
PRAMEF17Q5VTA0 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEF17Q5VTA0 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.28■□□□□ 0.2
PRAMEF17Q5VTA0 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEF17Q5VTA0 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEF17Q5VTA0 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEF17Q5VTA0 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEF17Q5VTA0 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.28■□□□□ 0.2
PRAMEF17Q5VTA0 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEF17Q5VTA0 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEF17Q5VTA0 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PRAMEF17Q5VTA0 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
PRAMEF17Q5VTA0 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.27■□□□□ 0.2
PRAMEF17Q5VTA0 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PRAMEF17Q5VTA0 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.27■□□□□ 0.2
PRAMEF17Q5VTA0 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
PRAMEF17Q5VTA0 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
PRAMEF17Q5VTA0 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.27■□□□□ 0.2
PRAMEF17Q5VTA0 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PRAMEF17Q5VTA0 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.27■□□□□ 0.2
PRAMEF17Q5VTA0 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PRAMEF17Q5VTA0 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.27■□□□□ 0.2
PRAMEF17Q5VTA0 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.27■□□□□ 0.2
PRAMEF17Q5VTA0 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PRAMEF17Q5VTA0 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
PRAMEF17Q5VTA0 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
PRAMEF17Q5VTA0 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PRAMEF17Q5VTA0 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
PRAMEF17Q5VTA0 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.27■□□□□ 0.2
PRAMEF17Q5VTA0 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PRAMEF17Q5VTA0 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PRAMEF17Q5VTA0 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
PRAMEF17Q5VTA0 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PRAMEF17Q5VTA0 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
PRAMEF17Q5VTA0 AC211486.1-202ENST00000416371 468 ntBASIC16.27■□□□□ 0.2
PRAMEF17Q5VTA0 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.27■□□□□ 0.2
PRAMEF17Q5VTA0 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.27■□□□□ 0.2
PRAMEF17Q5VTA0 AC087163.2-201ENST00000457299 853 ntBASIC16.27■□□□□ 0.2
PRAMEF17Q5VTA0 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.27■□□□□ 0.2
PRAMEF17Q5VTA0 CXCL1P1-201ENST00000502804 216 ntBASIC16.27■□□□□ 0.2
PRAMEF17Q5VTA0 AC211476.1-201ENST00000503899 468 ntBASIC16.27■□□□□ 0.2
PRAMEF17Q5VTA0 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.27■□□□□ 0.2
PRAMEF17Q5VTA0 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PRAMEF17Q5VTA0 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.27■□□□□ 0.2
PRAMEF17Q5VTA0 PDPK2P-202ENST00000562415 1191 ntBASIC16.27■□□□□ 0.2
PRAMEF17Q5VTA0 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC16.27■□□□□ 0.2
PRAMEF17Q5VTA0 AC005829.1-201ENST00000570002 483 ntBASIC16.27■□□□□ 0.2
PRAMEF17Q5VTA0 AP001160.2-201ENST00000596071 487 ntBASIC16.27■□□□□ 0.2
PRAMEF17Q5VTA0 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.27■□□□□ 0.2
PRAMEF17Q5VTA0 AL596442.2-201ENST00000610240 980 ntBASIC16.27■□□□□ 0.2
PRAMEF17Q5VTA0 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PRAMEF17Q5VTA0 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.27■□□□□ 0.2
PRAMEF17Q5VTA0 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PRAMEF17Q5VTA0 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.27■□□□□ 0.2
PRAMEF17Q5VTA0 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
PRAMEF17Q5VTA0 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
PRAMEF17Q5VTA0 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
PRAMEF17Q5VTA0 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
PRAMEF17Q5VTA0 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
PRAMEF17Q5VTA0 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
PRAMEF17Q5VTA0 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.27■□□□□ 0.19
PRAMEF17Q5VTA0 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
PRAMEF17Q5VTA0 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
PRAMEF17Q5VTA0 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PRAMEF17Q5VTA0 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.26■□□□□ 0.19
PRAMEF17Q5VTA0 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
PRAMEF17Q5VTA0 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.26■□□□□ 0.19
PRAMEF17Q5VTA0 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.26■□□□□ 0.19
PRAMEF17Q5VTA0 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
PRAMEF17Q5VTA0 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
PRAMEF17Q5VTA0 NOC2LP2-201ENST00000407594 1944 ntBASIC16.26■□□□□ 0.19
PRAMEF17Q5VTA0 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PRAMEF17Q5VTA0 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
PRAMEF17Q5VTA0 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
PRAMEF17Q5VTA0 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC16.26■□□□□ 0.19
PRAMEF17Q5VTA0 DNAJB3-202ENST00000449667 1266 ntBASIC16.26■□□□□ 0.19
PRAMEF17Q5VTA0 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.26■□□□□ 0.19
PRAMEF17Q5VTA0 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.26■□□□□ 0.19
PRAMEF17Q5VTA0 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.26■□□□□ 0.19
PRAMEF17Q5VTA0 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC16.26■□□□□ 0.19
PRAMEF17Q5VTA0 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC16.26■□□□□ 0.19
PRAMEF17Q5VTA0 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
PRAMEF17Q5VTA0 ACTL9-202ENST00000612068 1252 ntBASIC16.26■□□□□ 0.19
PRAMEF17Q5VTA0 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.26■□□□□ 0.19
PRAMEF17Q5VTA0 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PRAMEF17Q5VTA0 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PRAMEF17Q5VTA0 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
PRAMEF17Q5VTA0 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
PRAMEF17Q5VTA0 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.26■□□□□ 0.19
PRAMEF17Q5VTA0 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.25■□□□□ 0.19
PRAMEF17Q5VTA0 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRAMEF17Q5VTA0 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
PRAMEF17Q5VTA0 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRAMEF17Q5VTA0 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRAMEF17Q5VTA0 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.25■□□□□ 0.19
PRAMEF17Q5VTA0 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms