Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC27.45■■□□□ 1.99
SNAPC4Q5SXM2 STARD13-205ENST00000439831 945 ntTSL 2 BASIC27.45■■□□□ 1.99
SNAPC4Q5SXM2 GALT-202ENST00000450095 1280 ntTSL 2 BASIC27.45■■□□□ 1.99
SNAPC4Q5SXM2 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC27.45■■□□□ 1.99
SNAPC4Q5SXM2 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC27.45■■□□□ 1.99
SNAPC4Q5SXM2 5S_rRNA.22-201ENST00000614916 106 ntBASIC27.45■■□□□ 1.99
SNAPC4Q5SXM2 WNT11-204ENST00000621122 789 ntTSL 5 BASIC27.45■■□□□ 1.99
SNAPC4Q5SXM2 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
SNAPC4Q5SXM2 KRT8P44-201ENST00000441609 1350 ntBASIC27.45■■□□□ 1.99
SNAPC4Q5SXM2 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
SNAPC4Q5SXM2 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC27.45■■□□□ 1.98
SNAPC4Q5SXM2 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
SNAPC4Q5SXM2 PODN-203ENST00000395871 2744 ntTSL 5 BASIC27.45■■□□□ 1.98
SNAPC4Q5SXM2 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC27.44■■□□□ 1.98
SNAPC4Q5SXM2 AC023310.3-201ENST00000557027 670 ntBASIC27.44■■□□□ 1.98
SNAPC4Q5SXM2 AC100756.1-201ENST00000562736 682 ntBASIC27.44■■□□□ 1.98
SNAPC4Q5SXM2 AC138749.3-201ENST00000567691 622 ntBASIC27.44■■□□□ 1.98
SNAPC4Q5SXM2 AC116165.1-201ENST00000611806 668 ntBASIC27.44■■□□□ 1.98
SNAPC4Q5SXM2 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
SNAPC4Q5SXM2 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
SNAPC4Q5SXM2 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
SNAPC4Q5SXM2 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC27.44■■□□□ 1.98
SNAPC4Q5SXM2 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
SNAPC4Q5SXM2 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
SNAPC4Q5SXM2 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
SNAPC4Q5SXM2 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
SNAPC4Q5SXM2 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
SNAPC4Q5SXM2 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC27.44■■□□□ 1.98
SNAPC4Q5SXM2 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
SNAPC4Q5SXM2 EGFEM1P-202ENST00000431685 1563 ntBASIC27.44■■□□□ 1.98
SNAPC4Q5SXM2 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
SNAPC4Q5SXM2 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
SNAPC4Q5SXM2 AC092933.1-201ENST00000393644 945 ntBASIC27.44■■□□□ 1.98
SNAPC4Q5SXM2 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC27.44■■□□□ 1.98
SNAPC4Q5SXM2 BCYRN1-201ENST00000418539 200 ntBASIC27.44■■□□□ 1.98
SNAPC4Q5SXM2 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC27.44■■□□□ 1.98
SNAPC4Q5SXM2 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC27.44■■□□□ 1.98
SNAPC4Q5SXM2 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC27.44■■□□□ 1.98
SNAPC4Q5SXM2 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC27.44■■□□□ 1.98
SNAPC4Q5SXM2 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC27.44■■□□□ 1.98
SNAPC4Q5SXM2 RPSAP52-203ENST00000622976 1023 ntBASIC27.44■■□□□ 1.98
SNAPC4Q5SXM2 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC27.44■■□□□ 1.98
SNAPC4Q5SXM2 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC27.43■■□□□ 1.98
SNAPC4Q5SXM2 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
SNAPC4Q5SXM2 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
SNAPC4Q5SXM2 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC27.43■■□□□ 1.98
SNAPC4Q5SXM2 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
SNAPC4Q5SXM2 SLC25A1P3-201ENST00000395415 828 ntBASIC27.43■■□□□ 1.98
SNAPC4Q5SXM2 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC27.43■■□□□ 1.98
SNAPC4Q5SXM2 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC27.43■■□□□ 1.98
SNAPC4Q5SXM2 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC27.43■■□□□ 1.98
SNAPC4Q5SXM2 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC27.43■■□□□ 1.98
SNAPC4Q5SXM2 SRD5A3P1-201ENST00000603021 949 ntBASIC27.43■■□□□ 1.98
SNAPC4Q5SXM2 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
SNAPC4Q5SXM2 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
SNAPC4Q5SXM2 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC27.43■■□□□ 1.98
SNAPC4Q5SXM2 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC27.43■■□□□ 1.98
SNAPC4Q5SXM2 AC073439.1-201ENST00000624121 1774 ntBASIC27.43■■□□□ 1.98
SNAPC4Q5SXM2 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC27.43■■□□□ 1.98
SNAPC4Q5SXM2 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC27.42■■□□□ 1.98
SNAPC4Q5SXM2 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC27.42■■□□□ 1.98
SNAPC4Q5SXM2 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
SNAPC4Q5SXM2 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC27.42■■□□□ 1.98
SNAPC4Q5SXM2 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC27.42■■□□□ 1.98
SNAPC4Q5SXM2 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC27.42■■□□□ 1.98
SNAPC4Q5SXM2 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
SNAPC4Q5SXM2 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC27.42■■□□□ 1.98
SNAPC4Q5SXM2 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC27.42■■□□□ 1.98
SNAPC4Q5SXM2 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
SNAPC4Q5SXM2 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC27.42■■□□□ 1.98
SNAPC4Q5SXM2 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
SNAPC4Q5SXM2 AL589987.1-201ENST00000453380 819 ntBASIC27.42■■□□□ 1.98
SNAPC4Q5SXM2 AC007389.4-201ENST00000454674 793 ntBASIC27.42■■□□□ 1.98
SNAPC4Q5SXM2 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
SNAPC4Q5SXM2 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC27.42■■□□□ 1.98
SNAPC4Q5SXM2 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC27.42■■□□□ 1.98
SNAPC4Q5SXM2 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
SNAPC4Q5SXM2 GPR182-203ENST00000622922 591 ntBASIC27.42■■□□□ 1.98
SNAPC4Q5SXM2 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC27.42■■□□□ 1.98
SNAPC4Q5SXM2 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC27.42■■□□□ 1.98
SNAPC4Q5SXM2 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC27.42■■□□□ 1.98
SNAPC4Q5SXM2 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC27.42■■□□□ 1.98
SNAPC4Q5SXM2 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
SNAPC4Q5SXM2 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
SNAPC4Q5SXM2 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
SNAPC4Q5SXM2 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
SNAPC4Q5SXM2 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC27.41■■□□□ 1.98
SNAPC4Q5SXM2 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
SNAPC4Q5SXM2 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC27.41■■□□□ 1.98
SNAPC4Q5SXM2 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
SNAPC4Q5SXM2 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
SNAPC4Q5SXM2 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC27.41■■□□□ 1.98
SNAPC4Q5SXM2 RBM39-205ENST00000397370 612 ntTSL 2 BASIC27.41■■□□□ 1.98
SNAPC4Q5SXM2 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC27.41■■□□□ 1.98
SNAPC4Q5SXM2 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC27.41■■□□□ 1.98
SNAPC4Q5SXM2 MYCLP2-201ENST00000449268 967 ntBASIC27.41■■□□□ 1.98
SNAPC4Q5SXM2 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC27.41■■□□□ 1.98
SNAPC4Q5SXM2 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC27.41■■□□□ 1.98
SNAPC4Q5SXM2 FTH1-202ENST00000526640 786 ntTSL 2 BASIC27.41■■□□□ 1.98
SNAPC4Q5SXM2 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC27.41■■□□□ 1.98
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms