Protein–RNA interactions for Protein: Q2NL82

TSR1, Pre-rRNA-processing protein TSR1 homolog, humanhuman

Known RBP Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1Q2NL82 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TSR1Q2NL82 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.78■□□□□ 0.6
TSR1Q2NL82 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TSR1Q2NL82 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TSR1Q2NL82 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TSR1Q2NL82 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TSR1Q2NL82 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TSR1Q2NL82 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TSR1Q2NL82 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TSR1Q2NL82 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
TSR1Q2NL82 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC18.77■□□□□ 0.6
TSR1Q2NL82 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC18.77■□□□□ 0.6
TSR1Q2NL82 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
TSR1Q2NL82 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TSR1Q2NL82 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TSR1Q2NL82 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TSR1Q2NL82 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
TSR1Q2NL82 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
TSR1Q2NL82 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
TSR1Q2NL82 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
TSR1Q2NL82 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TSR1Q2NL82 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TSR1Q2NL82 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TSR1Q2NL82 YBX1P2-201ENST00000489612 999 ntBASIC18.77■□□□□ 0.6
TSR1Q2NL82 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18.77■□□□□ 0.6
TSR1Q2NL82 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TSR1Q2NL82 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.77■□□□□ 0.6
TSR1Q2NL82 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.77■□□□□ 0.6
TSR1Q2NL82 AL390719.2-201ENST00000606993 987 ntBASIC18.77■□□□□ 0.6
TSR1Q2NL82 AC019129.2-201ENST00000609837 1235 ntBASIC18.77■□□□□ 0.6
TSR1Q2NL82 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TSR1Q2NL82 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TSR1Q2NL82 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
TSR1Q2NL82 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TSR1Q2NL82 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TSR1Q2NL82 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TSR1Q2NL82 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
TSR1Q2NL82 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TSR1Q2NL82 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TSR1Q2NL82 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
TSR1Q2NL82 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TSR1Q2NL82 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
TSR1Q2NL82 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TSR1Q2NL82 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC18.77■□□□□ 0.59
TSR1Q2NL82 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC18.77■□□□□ 0.59
TSR1Q2NL82 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TSR1Q2NL82 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TSR1Q2NL82 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC18.76■□□□□ 0.59
TSR1Q2NL82 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TSR1Q2NL82 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TSR1Q2NL82 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TSR1Q2NL82 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC18.76■□□□□ 0.59
TSR1Q2NL82 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TSR1Q2NL82 Z83836.1-201ENST00000624605 1642 ntBASIC18.76■□□□□ 0.59
TSR1Q2NL82 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TSR1Q2NL82 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TSR1Q2NL82 BAALC-202ENST00000306391 243 ntTSL 5 BASIC18.76■□□□□ 0.59
TSR1Q2NL82 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18.76■□□□□ 0.59
TSR1Q2NL82 HBZP1-201ENST00000354915 429 ntBASIC18.76■□□□□ 0.59
TSR1Q2NL82 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC18.76■□□□□ 0.59
TSR1Q2NL82 AC007967.3-201ENST00000434308 558 ntBASIC18.76■□□□□ 0.59
TSR1Q2NL82 GUSBP12-201ENST00000513727 720 ntBASIC18.76■□□□□ 0.59
TSR1Q2NL82 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.76■□□□□ 0.59
TSR1Q2NL82 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.76■□□□□ 0.59
TSR1Q2NL82 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.76■□□□□ 0.59
TSR1Q2NL82 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TSR1Q2NL82 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18.76■□□□□ 0.59
TSR1Q2NL82 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
TSR1Q2NL82 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.76■□□□□ 0.59
TSR1Q2NL82 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TSR1Q2NL82 RNF216P1-203ENST00000404404 2427 ntBASIC18.76■□□□□ 0.59
TSR1Q2NL82 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TSR1Q2NL82 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
TSR1Q2NL82 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TSR1Q2NL82 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TSR1Q2NL82 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TSR1Q2NL82 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
TSR1Q2NL82 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TSR1Q2NL82 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TSR1Q2NL82 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TSR1Q2NL82 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
TSR1Q2NL82 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TSR1Q2NL82 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC18.75■□□□□ 0.59
TSR1Q2NL82 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TSR1Q2NL82 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
TSR1Q2NL82 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
TSR1Q2NL82 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC18.75■□□□□ 0.59
TSR1Q2NL82 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
TSR1Q2NL82 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
TSR1Q2NL82 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.75■□□□□ 0.59
TSR1Q2NL82 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TSR1Q2NL82 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
TSR1Q2NL82 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TSR1Q2NL82 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TSR1Q2NL82 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TSR1Q2NL82 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
TSR1Q2NL82 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TSR1Q2NL82 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TSR1Q2NL82 HOMER2P1-201ENST00000455653 964 ntBASIC18.75■□□□□ 0.59
TSR1Q2NL82 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms