Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC20.54■□□□□ 0.88
RFX7Q2KHR2 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC20.54■□□□□ 0.88
RFX7Q2KHR2 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RFX7Q2KHR2 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
RFX7Q2KHR2 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
RFX7Q2KHR2 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC20.54■□□□□ 0.88
RFX7Q2KHR2 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC20.54■□□□□ 0.88
RFX7Q2KHR2 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RFX7Q2KHR2 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RFX7Q2KHR2 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RFX7Q2KHR2 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC20.54■□□□□ 0.88
RFX7Q2KHR2 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RFX7Q2KHR2 PRORSD1P-202ENST00000563365 2154 ntBASIC20.54■□□□□ 0.88
RFX7Q2KHR2 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RFX7Q2KHR2 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RFX7Q2KHR2 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RFX7Q2KHR2 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
RFX7Q2KHR2 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RFX7Q2KHR2 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RFX7Q2KHR2 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RFX7Q2KHR2 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
RFX7Q2KHR2 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RFX7Q2KHR2 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RFX7Q2KHR2 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RFX7Q2KHR2 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RFX7Q2KHR2 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
RFX7Q2KHR2 CD82-202ENST00000342935 967 ntTSL 5 BASIC20.53■□□□□ 0.88
RFX7Q2KHR2 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RFX7Q2KHR2 LBH-203ENST00000404397 543 ntTSL 4 BASIC20.53■□□□□ 0.88
RFX7Q2KHR2 SMN2-210ENST00000511812 867 ntTSL 2 BASIC20.53■□□□□ 0.88
RFX7Q2KHR2 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC20.53■□□□□ 0.88
RFX7Q2KHR2 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
RFX7Q2KHR2 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RFX7Q2KHR2 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RFX7Q2KHR2 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC20.53■□□□□ 0.88
RFX7Q2KHR2 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
RFX7Q2KHR2 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RFX7Q2KHR2 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RFX7Q2KHR2 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC20.53■□□□□ 0.88
RFX7Q2KHR2 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC20.53■□□□□ 0.88
RFX7Q2KHR2 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC20.53■□□□□ 0.88
RFX7Q2KHR2 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RFX7Q2KHR2 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RFX7Q2KHR2 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
RFX7Q2KHR2 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
RFX7Q2KHR2 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RFX7Q2KHR2 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RFX7Q2KHR2 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RFX7Q2KHR2 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RFX7Q2KHR2 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC20.52■□□□□ 0.88
RFX7Q2KHR2 FAM58CP-201ENST00000435741 640 ntBASIC20.52■□□□□ 0.88
RFX7Q2KHR2 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC20.52■□□□□ 0.88
RFX7Q2KHR2 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC20.52■□□□□ 0.88
RFX7Q2KHR2 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC20.52■□□□□ 0.88
RFX7Q2KHR2 AC068137.2-201ENST00000605408 478 ntBASIC20.52■□□□□ 0.88
RFX7Q2KHR2 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC20.52■□□□□ 0.88
RFX7Q2KHR2 AC092902.6-201ENST00000641783 218 ntBASIC20.52■□□□□ 0.88
RFX7Q2KHR2 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
RFX7Q2KHR2 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.52■□□□□ 0.88
RFX7Q2KHR2 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
RFX7Q2KHR2 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
RFX7Q2KHR2 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
RFX7Q2KHR2 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RFX7Q2KHR2 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RFX7Q2KHR2 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RFX7Q2KHR2 AC005915.1-201ENST00000624912 2018 ntBASIC20.52■□□□□ 0.87
RFX7Q2KHR2 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
RFX7Q2KHR2 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
RFX7Q2KHR2 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RFX7Q2KHR2 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
RFX7Q2KHR2 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RFX7Q2KHR2 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC20.51■□□□□ 0.87
RFX7Q2KHR2 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RFX7Q2KHR2 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RFX7Q2KHR2 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RFX7Q2KHR2 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RFX7Q2KHR2 CNN2P11-201ENST00000429351 262 ntBASIC20.51■□□□□ 0.87
RFX7Q2KHR2 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
RFX7Q2KHR2 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
RFX7Q2KHR2 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC20.51■□□□□ 0.87
RFX7Q2KHR2 AC091167.2-201ENST00000579581 588 ntBASIC20.51■□□□□ 0.87
RFX7Q2KHR2 AC023141.13-201ENST00000604991 943 ntBASIC20.51■□□□□ 0.87
RFX7Q2KHR2 AC013467.2-201ENST00000605472 835 ntBASIC20.51■□□□□ 0.87
RFX7Q2KHR2 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC20.51■□□□□ 0.87
RFX7Q2KHR2 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RFX7Q2KHR2 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RFX7Q2KHR2 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RFX7Q2KHR2 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC20.51■□□□□ 0.87
RFX7Q2KHR2 AC022211.2-201ENST00000585075 2527 ntBASIC20.51■□□□□ 0.87
RFX7Q2KHR2 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
RFX7Q2KHR2 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RFX7Q2KHR2 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
RFX7Q2KHR2 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC20.51■□□□□ 0.87
RFX7Q2KHR2 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RFX7Q2KHR2 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RFX7Q2KHR2 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RFX7Q2KHR2 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
RFX7Q2KHR2 KRT18P28-201ENST00000453838 1332 ntBASIC20.5■□□□□ 0.87
RFX7Q2KHR2 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC20.5■□□□□ 0.87
RFX7Q2KHR2 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms