Protein–RNA interactions for Protein: Q15042

RAB3GAP1, Rab3 GTPase-activating protein catalytic subunit, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1Q15042 LYSMD4-203ENST00000378904 2122 ntBASIC20.77■□□□□ 0.92
RAB3GAP1Q15042 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RAB3GAP1Q15042 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC20.77■□□□□ 0.92
RAB3GAP1Q15042 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC20.77■□□□□ 0.92
RAB3GAP1Q15042 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RAB3GAP1Q15042 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RAB3GAP1Q15042 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RAB3GAP1Q15042 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RAB3GAP1Q15042 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC20.77■□□□□ 0.92
RAB3GAP1Q15042 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC20.77■□□□□ 0.92
RAB3GAP1Q15042 AC103564.2-201ENST00000432853 1299 ntBASIC20.77■□□□□ 0.92
RAB3GAP1Q15042 NKTR-203ENST00000442970 646 ntTSL 2 BASIC20.77■□□□□ 0.92
RAB3GAP1Q15042 RNA5SP415-201ENST00000517246 115 ntBASIC20.77■□□□□ 0.92
RAB3GAP1Q15042 AC092865.5-201ENST00000545435 363 ntBASIC20.77■□□□□ 0.92
RAB3GAP1Q15042 AC145285.3-201ENST00000564603 959 ntBASIC20.77■□□□□ 0.92
RAB3GAP1Q15042 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC20.77■□□□□ 0.92
RAB3GAP1Q15042 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC20.77■□□□□ 0.92
RAB3GAP1Q15042 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
RAB3GAP1Q15042 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC20.77■□□□□ 0.92
RAB3GAP1Q15042 AC073592.5-201ENST00000624854 528 ntBASIC20.77■□□□□ 0.92
RAB3GAP1Q15042 CAND2-206ENST00000626378 333 ntTSL 5 BASIC20.77■□□□□ 0.92
RAB3GAP1Q15042 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
RAB3GAP1Q15042 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC20.77■□□□□ 0.92
RAB3GAP1Q15042 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.92
RAB3GAP1Q15042 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RAB3GAP1Q15042 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC20.77■□□□□ 0.92
RAB3GAP1Q15042 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC20.77■□□□□ 0.92
RAB3GAP1Q15042 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC20.77■□□□□ 0.92
RAB3GAP1Q15042 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC20.77■□□□□ 0.92
RAB3GAP1Q15042 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC20.77■□□□□ 0.91
RAB3GAP1Q15042 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
RAB3GAP1Q15042 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC20.77■□□□□ 0.91
RAB3GAP1Q15042 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
RAB3GAP1Q15042 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
RAB3GAP1Q15042 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
RAB3GAP1Q15042 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RAB3GAP1Q15042 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC20.76■□□□□ 0.91
RAB3GAP1Q15042 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RAB3GAP1Q15042 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RAB3GAP1Q15042 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
RAB3GAP1Q15042 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
RAB3GAP1Q15042 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC20.76■□□□□ 0.91
RAB3GAP1Q15042 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RAB3GAP1Q15042 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC20.76■□□□□ 0.91
RAB3GAP1Q15042 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RAB3GAP1Q15042 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RAB3GAP1Q15042 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
RAB3GAP1Q15042 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC20.76■□□□□ 0.91
RAB3GAP1Q15042 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RAB3GAP1Q15042 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
RAB3GAP1Q15042 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RAB3GAP1Q15042 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC20.76■□□□□ 0.91
RAB3GAP1Q15042 MED29-202ENST00000594368 1471 ntTSL 2 BASIC20.75■□□□□ 0.91
RAB3GAP1Q15042 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC20.75■□□□□ 0.91
RAB3GAP1Q15042 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAB3GAP1Q15042 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAB3GAP1Q15042 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
RAB3GAP1Q15042 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAB3GAP1Q15042 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC20.75■□□□□ 0.91
RAB3GAP1Q15042 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC20.75■□□□□ 0.91
RAB3GAP1Q15042 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
RAB3GAP1Q15042 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
RAB3GAP1Q15042 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC20.75■□□□□ 0.91
RAB3GAP1Q15042 AC138932.1-201ENST00000534164 6830 ntBASIC20.75■□□□□ 0.91
RAB3GAP1Q15042 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC20.75■□□□□ 0.91
RAB3GAP1Q15042 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAB3GAP1Q15042 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RAB3GAP1Q15042 LAGE3P1-201ENST00000425356 484 ntBASIC20.75■□□□□ 0.91
RAB3GAP1Q15042 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC20.75■□□□□ 0.91
RAB3GAP1Q15042 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC20.75■□□□□ 0.91
RAB3GAP1Q15042 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC20.75■□□□□ 0.91
RAB3GAP1Q15042 SDCCAG3P1-201ENST00000589292 1150 ntBASIC20.75■□□□□ 0.91
RAB3GAP1Q15042 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC20.75■□□□□ 0.91
RAB3GAP1Q15042 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC20.75■□□□□ 0.91
RAB3GAP1Q15042 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAB3GAP1Q15042 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
RAB3GAP1Q15042 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAB3GAP1Q15042 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAB3GAP1Q15042 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAB3GAP1Q15042 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAB3GAP1Q15042 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
RAB3GAP1Q15042 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC20.75■□□□□ 0.91
RAB3GAP1Q15042 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAB3GAP1Q15042 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAB3GAP1Q15042 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAB3GAP1Q15042 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
RAB3GAP1Q15042 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAB3GAP1Q15042 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC20.75■□□□□ 0.91
RAB3GAP1Q15042 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC20.75■□□□□ 0.91
RAB3GAP1Q15042 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC20.75■□□□□ 0.91
RAB3GAP1Q15042 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC20.75■□□□□ 0.91
RAB3GAP1Q15042 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RAB3GAP1Q15042 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAB3GAP1Q15042 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC20.75■□□□□ 0.91
RAB3GAP1Q15042 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAB3GAP1Q15042 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RAB3GAP1Q15042 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC20.74■□□□□ 0.91
RAB3GAP1Q15042 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RAB3GAP1Q15042 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RAB3GAP1Q15042 AC046185.3-201ENST00000623228 1824 ntBASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms