Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 REXO1L6P-202ENST00000619970 1078 ntBASIC17.26■□□□□ 0.35
CDH17Q12864 PCDHB17P-201ENST00000539533 2393 ntBASIC17.26■□□□□ 0.35
CDH17Q12864 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CDH17Q12864 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CDH17Q12864 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH17Q12864 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CDH17Q12864 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH17Q12864 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.26■□□□□ 0.35
CDH17Q12864 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH17Q12864 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.26■□□□□ 0.35
CDH17Q12864 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH17Q12864 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH17Q12864 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH17Q12864 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH17Q12864 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH17Q12864 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH17Q12864 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDH17Q12864 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDH17Q12864 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CDH17Q12864 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDH17Q12864 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CDH17Q12864 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.25■□□□□ 0.35
CDH17Q12864 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.25■□□□□ 0.35
CDH17Q12864 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.25■□□□□ 0.35
CDH17Q12864 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.25■□□□□ 0.35
CDH17Q12864 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDH17Q12864 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDH17Q12864 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDH17Q12864 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDH17Q12864 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CDH17Q12864 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
CDH17Q12864 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDH17Q12864 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDH17Q12864 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CDH17Q12864 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.25■□□□□ 0.35
CDH17Q12864 LINC01711-201ENST00000598340 967 ntBASIC17.25■□□□□ 0.35
CDH17Q12864 AC008608.2-201ENST00000606089 416 ntBASIC17.25■□□□□ 0.35
CDH17Q12864 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.25■□□□□ 0.35
CDH17Q12864 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDH17Q12864 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDH17Q12864 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDH17Q12864 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
CDH17Q12864 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.25■□□□□ 0.35
CDH17Q12864 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CDH17Q12864 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
CDH17Q12864 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDH17Q12864 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDH17Q12864 PCDHA14-201ENST00000506751 2298 ntBASIC17.24■□□□□ 0.35
CDH17Q12864 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.24■□□□□ 0.35
CDH17Q12864 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDH17Q12864 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.24■□□□□ 0.35
CDH17Q12864 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
CDH17Q12864 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDH17Q12864 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDH17Q12864 AL118508.1-201ENST00000613502 2345 ntBASIC17.24■□□□□ 0.35
CDH17Q12864 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDH17Q12864 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDH17Q12864 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDH17Q12864 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CDH17Q12864 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.24■□□□□ 0.35
CDH17Q12864 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.24■□□□□ 0.35
CDH17Q12864 FGFR3P6-201ENST00000457012 610 ntBASIC17.24■□□□□ 0.35
CDH17Q12864 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.24■□□□□ 0.35
CDH17Q12864 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDH17Q12864 DUX4L17-201ENST00000557360 1267 ntBASIC17.24■□□□□ 0.35
CDH17Q12864 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.24■□□□□ 0.35
CDH17Q12864 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.24■□□□□ 0.35
CDH17Q12864 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.24■□□□□ 0.35
CDH17Q12864 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.24■□□□□ 0.35
CDH17Q12864 METTL23-204ENST00000586752 904 ntTSL 2 BASIC17.24■□□□□ 0.35
CDH17Q12864 AL139424.1-201ENST00000607572 797 ntBASIC17.24■□□□□ 0.35
CDH17Q12864 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.24■□□□□ 0.35
CDH17Q12864 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.24■□□□□ 0.35
CDH17Q12864 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDH17Q12864 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CDH17Q12864 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDH17Q12864 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDH17Q12864 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CDH17Q12864 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.24■□□□□ 0.35
CDH17Q12864 AC243591.1-201ENST00000452967 1364 ntBASIC17.24■□□□□ 0.35
CDH17Q12864 AC124067.4-201ENST00000519691 2379 ntBASIC17.24■□□□□ 0.35
CDH17Q12864 AL021920.2-201ENST00000624828 1351 ntBASIC17.24■□□□□ 0.35
CDH17Q12864 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CDH17Q12864 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.24■□□□□ 0.35
CDH17Q12864 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDH17Q12864 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CDH17Q12864 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDH17Q12864 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CDH17Q12864 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDH17Q12864 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDH17Q12864 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CDH17Q12864 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.23■□□□□ 0.35
CDH17Q12864 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
CDH17Q12864 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CDH17Q12864 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDH17Q12864 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
CDH17Q12864 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CDH17Q12864 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
CDH17Q12864 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDH17Q12864 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms