Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
DDR1Q08345 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
DDR1Q08345 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
DDR1Q08345 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
DDR1Q08345 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.98■□□□□ 0.95
DDR1Q08345 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
DDR1Q08345 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
DDR1Q08345 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
DDR1Q08345 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
DDR1Q08345 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC20.98■□□□□ 0.95
DDR1Q08345 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC20.98■□□□□ 0.95
DDR1Q08345 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC20.98■□□□□ 0.95
DDR1Q08345 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC20.98■□□□□ 0.95
DDR1Q08345 GNAQP1-201ENST00000444815 1067 ntBASIC20.98■□□□□ 0.95
DDR1Q08345 INE1-201ENST00000456273 945 ntBASIC20.98■□□□□ 0.95
DDR1Q08345 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC20.98■□□□□ 0.95
DDR1Q08345 GIMAP3P-201ENST00000495150 836 ntBASIC20.98■□□□□ 0.95
DDR1Q08345 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
DDR1Q08345 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC20.98■□□□□ 0.95
DDR1Q08345 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC20.98■□□□□ 0.95
DDR1Q08345 BANF1P1-201ENST00000553684 263 ntBASIC20.98■□□□□ 0.95
DDR1Q08345 PRR29-204ENST00000577953 565 ntTSL 4 BASIC20.98■□□□□ 0.95
DDR1Q08345 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC20.98■□□□□ 0.95
DDR1Q08345 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC20.98■□□□□ 0.95
DDR1Q08345 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
DDR1Q08345 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC20.98■□□□□ 0.95
DDR1Q08345 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
DDR1Q08345 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
DDR1Q08345 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
DDR1Q08345 AIRN-201ENST00000601203 4374 ntBASIC20.98■□□□□ 0.95
DDR1Q08345 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC20.98■□□□□ 0.95
DDR1Q08345 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC20.98■□□□□ 0.95
DDR1Q08345 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
DDR1Q08345 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
DDR1Q08345 EGFEM1P-202ENST00000431685 1563 ntBASIC20.97■□□□□ 0.95
DDR1Q08345 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
DDR1Q08345 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
DDR1Q08345 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
DDR1Q08345 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
DDR1Q08345 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
DDR1Q08345 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
DDR1Q08345 SLC25A1P3-201ENST00000395415 828 ntBASIC20.97■□□□□ 0.95
DDR1Q08345 AL353779.1-201ENST00000434793 351 ntBASIC20.97■□□□□ 0.95
DDR1Q08345 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC20.97■□□□□ 0.95
DDR1Q08345 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC20.97■□□□□ 0.95
DDR1Q08345 MIR6799-201ENST00000620297 69 ntBASIC20.97■□□□□ 0.95
DDR1Q08345 RAB34-223ENST00000636154 730 ntTSL 2 BASIC20.97■□□□□ 0.95
DDR1Q08345 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC20.97■□□□□ 0.95
DDR1Q08345 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
DDR1Q08345 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
DDR1Q08345 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC20.97■□□□□ 0.95
DDR1Q08345 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
DDR1Q08345 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
DDR1Q08345 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
DDR1Q08345 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
DDR1Q08345 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
DDR1Q08345 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
DDR1Q08345 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
DDR1Q08345 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
DDR1Q08345 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC20.96■□□□□ 0.95
DDR1Q08345 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
DDR1Q08345 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
DDR1Q08345 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
DDR1Q08345 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
DDR1Q08345 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
DDR1Q08345 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC20.96■□□□□ 0.95
DDR1Q08345 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
DDR1Q08345 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC20.96■□□□□ 0.95
DDR1Q08345 PP14571-201ENST00000404327 934 ntTSL 2 BASIC20.96■□□□□ 0.95
DDR1Q08345 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
DDR1Q08345 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC20.96■□□□□ 0.95
DDR1Q08345 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
DDR1Q08345 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
DDR1Q08345 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
DDR1Q08345 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
DDR1Q08345 ARL16-202ENST00000570561 768 ntTSL 2 BASIC20.96■□□□□ 0.95
DDR1Q08345 CYP2A7P1-201ENST00000595391 815 ntBASIC20.96■□□□□ 0.95
DDR1Q08345 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
DDR1Q08345 AP001350.2-201ENST00000625104 1094 ntBASIC20.96■□□□□ 0.95
DDR1Q08345 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC20.96■□□□□ 0.95
DDR1Q08345 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC20.96■□□□□ 0.95
DDR1Q08345 AC098818.2-201ENST00000564925 2320 ntBASIC20.96■□□□□ 0.95
DDR1Q08345 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
DDR1Q08345 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC20.96■□□□□ 0.95
DDR1Q08345 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
DDR1Q08345 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC20.96■□□□□ 0.95
DDR1Q08345 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
DDR1Q08345 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
DDR1Q08345 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
DDR1Q08345 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
DDR1Q08345 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
DDR1Q08345 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.95
DDR1Q08345 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC20.95■□□□□ 0.94
DDR1Q08345 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC20.95■□□□□ 0.94
DDR1Q08345 SLC9A3P2-201ENST00000447821 2021 ntBASIC20.95■□□□□ 0.94
DDR1Q08345 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC20.95■□□□□ 0.94
DDR1Q08345 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC20.95■□□□□ 0.94
DDR1Q08345 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC20.95■□□□□ 0.94
DDR1Q08345 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
DDR1Q08345 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms