Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC14.99□□□□□ -0.01
TFF3Q07654 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.99□□□□□ -0.01
TFF3Q07654 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TFF3Q07654 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
TFF3Q07654 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TFF3Q07654 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC14.99□□□□□ -0.01
TFF3Q07654 AQP6-203ENST00000551733 849 ntTSL 3 BASIC14.99□□□□□ -0.01
TFF3Q07654 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC14.99□□□□□ -0.01
TFF3Q07654 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC14.99□□□□□ -0.01
TFF3Q07654 AC012313.1-201ENST00000593393 3059 ntBASIC14.99□□□□□ -0.01
TFF3Q07654 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.99□□□□□ -0.01
TFF3Q07654 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
TFF3Q07654 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TFF3Q07654 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
TFF3Q07654 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TFF3Q07654 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC14.99□□□□□ -0.01
TFF3Q07654 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TFF3Q07654 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
TFF3Q07654 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC14.98□□□□□ -0.01
TFF3Q07654 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TFF3Q07654 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TFF3Q07654 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
TFF3Q07654 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC14.98□□□□□ -0.01
TFF3Q07654 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TFF3Q07654 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TFF3Q07654 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC14.98□□□□□ -0.01
TFF3Q07654 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TFF3Q07654 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TFF3Q07654 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
TFF3Q07654 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC14.98□□□□□ -0.01
TFF3Q07654 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TFF3Q07654 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC14.98□□□□□ -0.01
TFF3Q07654 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TFF3Q07654 HNRNPFP1-201ENST00000391730 1133 ntBASIC14.98□□□□□ -0.01
TFF3Q07654 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC14.98□□□□□ -0.01
TFF3Q07654 AC107918.2-201ENST00000530817 355 ntBASIC14.98□□□□□ -0.01
TFF3Q07654 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TFF3Q07654 DUX4L27-201ENST00000554796 1261 ntBASIC14.98□□□□□ -0.01
TFF3Q07654 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC14.98□□□□□ -0.01
TFF3Q07654 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC14.98□□□□□ -0.01
TFF3Q07654 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC14.98□□□□□ -0.01
TFF3Q07654 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TFF3Q07654 BSG-214ENST00000614867 960 ntTSL 3 BASIC14.98□□□□□ -0.01
TFF3Q07654 AJ011932.1-201ENST00000621707 465 ntBASIC14.98□□□□□ -0.01
TFF3Q07654 AL645728.2-201ENST00000641974 660 ntBASIC14.98□□□□□ -0.01
TFF3Q07654 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TFF3Q07654 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC14.98□□□□□ -0.01
TFF3Q07654 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC14.98□□□□□ -0.01
TFF3Q07654 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TFF3Q07654 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
TFF3Q07654 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TFF3Q07654 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TFF3Q07654 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC14.98□□□□□ -0.01
TFF3Q07654 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC14.98□□□□□ -0.01
TFF3Q07654 REXO1L11P-201ENST00000620964 1927 ntBASIC14.98□□□□□ -0.01
TFF3Q07654 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC14.98□□□□□ -0.01
TFF3Q07654 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TFF3Q07654 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
TFF3Q07654 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TFF3Q07654 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
TFF3Q07654 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TFF3Q07654 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC14.97□□□□□ -0.01
TFF3Q07654 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TFF3Q07654 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TFF3Q07654 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TFF3Q07654 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC14.97□□□□□ -0.01
TFF3Q07654 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TFF3Q07654 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC14.97□□□□□ -0.01
TFF3Q07654 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
TFF3Q07654 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TFF3Q07654 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TFF3Q07654 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TFF3Q07654 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TFF3Q07654 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
TFF3Q07654 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TFF3Q07654 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC14.97□□□□□ -0.01
TFF3Q07654 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC14.97□□□□□ -0.01
TFF3Q07654 SPDYE11-202ENST00000450699 704 ntBASIC14.97□□□□□ -0.01
TFF3Q07654 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TFF3Q07654 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC14.97□□□□□ -0.01
TFF3Q07654 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC14.97□□□□□ -0.01
TFF3Q07654 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TFF3Q07654 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
TFF3Q07654 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC14.97□□□□□ -0.01
TFF3Q07654 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC14.97□□□□□ -0.01
TFF3Q07654 AL512356.2-201ENST00000546955 174 ntBASIC14.97□□□□□ -0.01
TFF3Q07654 VPS29-207ENST00000549970 818 ntTSL 3 BASIC14.97□□□□□ -0.01
TFF3Q07654 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC14.97□□□□□ -0.01
TFF3Q07654 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TFF3Q07654 SPDYE9P-201ENST00000570642 692 ntBASIC14.97□□□□□ -0.01
TFF3Q07654 SPDYE10P-202ENST00000612005 668 ntBASIC14.97□□□□□ -0.01
TFF3Q07654 SPDYE8P-202ENST00000612377 668 ntBASIC14.97□□□□□ -0.01
TFF3Q07654 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TFF3Q07654 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC14.97□□□□□ -0.01
TFF3Q07654 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC14.97□□□□□ -0.01
TFF3Q07654 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC14.97□□□□□ -0.01
TFF3Q07654 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TFF3Q07654 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TFF3Q07654 EML3-212ENST00000494176 2901 ntTSL 2 BASIC14.97□□□□□ -0.01
TFF3Q07654 EML3-216ENST00000529309 2909 ntTSL 2 BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms