Protein–RNA interactions for Protein: Q03591

CFHR1, Complement factor H-related protein 1, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR1Q03591 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.2■□□□□ 0.18
CFHR1Q03591 RN7SL204P-201ENST00000582831 262 ntBASIC16.2■□□□□ 0.18
CFHR1Q03591 AL161645.1-201ENST00000622716 1255 ntBASIC16.2■□□□□ 0.18
CFHR1Q03591 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CFHR1Q03591 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.2■□□□□ 0.18
CFHR1Q03591 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.2■□□□□ 0.18
CFHR1Q03591 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CFHR1Q03591 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CFHR1Q03591 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CFHR1Q03591 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
CFHR1Q03591 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CFHR1Q03591 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CFHR1Q03591 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.19■□□□□ 0.18
CFHR1Q03591 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CFHR1Q03591 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CFHR1Q03591 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.19■□□□□ 0.18
CFHR1Q03591 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CFHR1Q03591 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.19■□□□□ 0.18
CFHR1Q03591 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CFHR1Q03591 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CFHR1Q03591 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CFHR1Q03591 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.19■□□□□ 0.18
CFHR1Q03591 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CFHR1Q03591 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CFHR1Q03591 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CFHR1Q03591 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CFHR1Q03591 RNU1-129P-201ENST00000384064 167 ntBASIC16.19■□□□□ 0.18
CFHR1Q03591 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CFHR1Q03591 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CFHR1Q03591 RN7SL589P-201ENST00000481268 310 ntBASIC16.19■□□□□ 0.18
CFHR1Q03591 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC16.19■□□□□ 0.18
CFHR1Q03591 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
CFHR1Q03591 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CFHR1Q03591 NAA60-208ENST00000570819 833 ntTSL 2 BASIC16.19■□□□□ 0.18
CFHR1Q03591 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.19■□□□□ 0.18
CFHR1Q03591 AC091167.2-201ENST00000579581 588 ntBASIC16.19■□□□□ 0.18
CFHR1Q03591 U1.21-201ENST00000580816 167 ntBASIC16.19■□□□□ 0.18
CFHR1Q03591 MPDU1-223ENST00000582151 728 ntBASIC16.19■□□□□ 0.18
CFHR1Q03591 AC015911.4-201ENST00000588022 1070 ntBASIC16.19■□□□□ 0.18
CFHR1Q03591 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
CFHR1Q03591 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CFHR1Q03591 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CFHR1Q03591 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CFHR1Q03591 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CFHR1Q03591 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CFHR1Q03591 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CFHR1Q03591 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.19■□□□□ 0.18
CFHR1Q03591 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CFHR1Q03591 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CFHR1Q03591 AL133373.2-201ENST00000623187 2828 ntBASIC16.18■□□□□ 0.18
CFHR1Q03591 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
CFHR1Q03591 CROCCP2-202ENST00000412962 2773 ntBASIC16.18■□□□□ 0.18
CFHR1Q03591 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.18■□□□□ 0.18
CFHR1Q03591 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CFHR1Q03591 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CFHR1Q03591 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CFHR1Q03591 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CFHR1Q03591 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CFHR1Q03591 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CFHR1Q03591 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CFHR1Q03591 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CFHR1Q03591 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CFHR1Q03591 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CFHR1Q03591 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.18■□□□□ 0.18
CFHR1Q03591 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.18■□□□□ 0.18
CFHR1Q03591 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.18■□□□□ 0.18
CFHR1Q03591 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CFHR1Q03591 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CFHR1Q03591 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CFHR1Q03591 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.18■□□□□ 0.18
CFHR1Q03591 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC16.18■□□□□ 0.18
CFHR1Q03591 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CFHR1Q03591 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.18■□□□□ 0.18
CFHR1Q03591 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.18■□□□□ 0.18
CFHR1Q03591 COX11-202ENST00000571584 1108 ntTSL 2 BASIC16.18■□□□□ 0.18
CFHR1Q03591 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CFHR1Q03591 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.18■□□□□ 0.18
CFHR1Q03591 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC16.18■□□□□ 0.18
CFHR1Q03591 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CFHR1Q03591 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
CFHR1Q03591 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.18■□□□□ 0.18
CFHR1Q03591 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CFHR1Q03591 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.18■□□□□ 0.18
CFHR1Q03591 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
CFHR1Q03591 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CFHR1Q03591 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CFHR1Q03591 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CFHR1Q03591 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CFHR1Q03591 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CFHR1Q03591 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CFHR1Q03591 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.18■□□□□ 0.18
CFHR1Q03591 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CFHR1Q03591 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CFHR1Q03591 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CFHR1Q03591 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CFHR1Q03591 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.17■□□□□ 0.18
CFHR1Q03591 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CFHR1Q03591 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CFHR1Q03591 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CFHR1Q03591 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms