Protein–RNA interactions for Protein: Q01804

OTUD4, OTU domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTUD4Q01804 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
OTUD4Q01804 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
OTUD4Q01804 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
OTUD4Q01804 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
OTUD4Q01804 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
OTUD4Q01804 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
OTUD4Q01804 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
OTUD4Q01804 LINC00982-205ENST00000420957 435 ntBASIC17.66■□□□□ 0.42
OTUD4Q01804 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
OTUD4Q01804 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
OTUD4Q01804 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.66■□□□□ 0.42
OTUD4Q01804 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.66■□□□□ 0.42
OTUD4Q01804 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.66■□□□□ 0.42
OTUD4Q01804 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC17.66■□□□□ 0.42
OTUD4Q01804 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
OTUD4Q01804 AP001269.4-201ENST00000609611 512 ntBASIC17.66■□□□□ 0.42
OTUD4Q01804 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
OTUD4Q01804 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
OTUD4Q01804 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
OTUD4Q01804 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
OTUD4Q01804 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
OTUD4Q01804 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
OTUD4Q01804 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.66■□□□□ 0.42
OTUD4Q01804 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
OTUD4Q01804 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
OTUD4Q01804 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.66■□□□□ 0.42
OTUD4Q01804 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
OTUD4Q01804 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.66■□□□□ 0.42
OTUD4Q01804 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
OTUD4Q01804 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
OTUD4Q01804 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.66■□□□□ 0.42
OTUD4Q01804 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
OTUD4Q01804 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
OTUD4Q01804 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
OTUD4Q01804 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.65■□□□□ 0.42
OTUD4Q01804 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.65■□□□□ 0.42
OTUD4Q01804 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
OTUD4Q01804 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
OTUD4Q01804 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
OTUD4Q01804 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.65■□□□□ 0.42
OTUD4Q01804 AL603756.1-201ENST00000606511 2163 ntBASIC17.65■□□□□ 0.42
OTUD4Q01804 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
OTUD4Q01804 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
OTUD4Q01804 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
OTUD4Q01804 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.65■□□□□ 0.42
OTUD4Q01804 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC17.65■□□□□ 0.42
OTUD4Q01804 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.65■□□□□ 0.42
OTUD4Q01804 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC17.65■□□□□ 0.42
OTUD4Q01804 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.65■□□□□ 0.42
OTUD4Q01804 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.65■□□□□ 0.42
OTUD4Q01804 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
OTUD4Q01804 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
OTUD4Q01804 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
OTUD4Q01804 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
OTUD4Q01804 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
OTUD4Q01804 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.65■□□□□ 0.42
OTUD4Q01804 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
OTUD4Q01804 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.65■□□□□ 0.42
OTUD4Q01804 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.65■□□□□ 0.42
OTUD4Q01804 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
OTUD4Q01804 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
OTUD4Q01804 AL645728.1-201ENST00000366221 2101 ntBASIC17.65■□□□□ 0.42
OTUD4Q01804 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.65■□□□□ 0.42
OTUD4Q01804 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
OTUD4Q01804 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.64■□□□□ 0.42
OTUD4Q01804 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
OTUD4Q01804 AP005117.1-201ENST00000584346 1413 ntBASIC17.64■□□□□ 0.42
OTUD4Q01804 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
OTUD4Q01804 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
OTUD4Q01804 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
OTUD4Q01804 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.64■□□□□ 0.41
OTUD4Q01804 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.64■□□□□ 0.41
OTUD4Q01804 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.64■□□□□ 0.41
OTUD4Q01804 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
OTUD4Q01804 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
OTUD4Q01804 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
OTUD4Q01804 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
OTUD4Q01804 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
OTUD4Q01804 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
OTUD4Q01804 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.64■□□□□ 0.41
OTUD4Q01804 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
OTUD4Q01804 KRT16P4-201ENST00000453883 522 ntBASIC17.64■□□□□ 0.41
OTUD4Q01804 AC132008.2-207ENST00000454517 770 ntBASIC17.64■□□□□ 0.41
OTUD4Q01804 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.64■□□□□ 0.41
OTUD4Q01804 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC17.64■□□□□ 0.41
OTUD4Q01804 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
OTUD4Q01804 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.64■□□□□ 0.41
OTUD4Q01804 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.64■□□□□ 0.41
OTUD4Q01804 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
OTUD4Q01804 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC17.64■□□□□ 0.41
OTUD4Q01804 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC17.64■□□□□ 0.41
OTUD4Q01804 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.64■□□□□ 0.41
OTUD4Q01804 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.64■□□□□ 0.41
OTUD4Q01804 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.64■□□□□ 0.41
OTUD4Q01804 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
OTUD4Q01804 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.64■□□□□ 0.41
OTUD4Q01804 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
OTUD4Q01804 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
OTUD4Q01804 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
OTUD4Q01804 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms