Protein–RNA interactions for Protein: P78348

ASIC1, Acid-sensing ion channel 1, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC1P78348 RNF216P1-203ENST00000404404 2427 ntBASIC19.07■□□□□ 0.64
ASIC1P78348 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
ASIC1P78348 CA12-203ENST00000422263 2556 ntTSL 2 BASIC19.07■□□□□ 0.64
ASIC1P78348 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
ASIC1P78348 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ASIC1P78348 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC19.07■□□□□ 0.64
ASIC1P78348 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ASIC1P78348 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ASIC1P78348 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ASIC1P78348 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ASIC1P78348 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC19.07■□□□□ 0.64
ASIC1P78348 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ASIC1P78348 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ASIC1P78348 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
ASIC1P78348 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
ASIC1P78348 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ASIC1P78348 FLJ38576-201ENST00000623820 2459 ntBASIC19.06■□□□□ 0.64
ASIC1P78348 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ASIC1P78348 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
ASIC1P78348 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC19.06■□□□□ 0.64
ASIC1P78348 HNRNPRP1-201ENST00000453465 1695 ntBASIC19.06■□□□□ 0.64
ASIC1P78348 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
ASIC1P78348 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC19.06■□□□□ 0.64
ASIC1P78348 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC19.06■□□□□ 0.64
ASIC1P78348 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
ASIC1P78348 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ASIC1P78348 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ASIC1P78348 NABP1-203ENST00000409510 843 ntTSL 5 BASIC19.06■□□□□ 0.64
ASIC1P78348 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ASIC1P78348 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC19.06■□□□□ 0.64
ASIC1P78348 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC19.06■□□□□ 0.64
ASIC1P78348 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC19.06■□□□□ 0.64
ASIC1P78348 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC19.06■□□□□ 0.64
ASIC1P78348 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ASIC1P78348 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC19.06■□□□□ 0.64
ASIC1P78348 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC19.06■□□□□ 0.64
ASIC1P78348 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
ASIC1P78348 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC19.06■□□□□ 0.64
ASIC1P78348 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
ASIC1P78348 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC19.06■□□□□ 0.64
ASIC1P78348 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC19.06■□□□□ 0.64
ASIC1P78348 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ASIC1P78348 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC19.06■□□□□ 0.64
ASIC1P78348 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ASIC1P78348 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ASIC1P78348 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
ASIC1P78348 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ASIC1P78348 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ASIC1P78348 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC19.05■□□□□ 0.64
ASIC1P78348 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
ASIC1P78348 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
ASIC1P78348 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC19.05■□□□□ 0.64
ASIC1P78348 AL590787.1-201ENST00000568856 1315 ntBASIC19.05■□□□□ 0.64
ASIC1P78348 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
ASIC1P78348 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
ASIC1P78348 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ASIC1P78348 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ASIC1P78348 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
ASIC1P78348 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ASIC1P78348 IPPK-202ENST00000375522 882 ntTSL 3 BASIC19.05■□□□□ 0.64
ASIC1P78348 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
ASIC1P78348 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ASIC1P78348 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC19.05■□□□□ 0.64
ASIC1P78348 AF238378.1-201ENST00000526806 358 ntBASIC19.05■□□□□ 0.64
ASIC1P78348 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC19.05■□□□□ 0.64
ASIC1P78348 RNF151-202ENST00000569210 853 ntTSL 2 BASIC19.05■□□□□ 0.64
ASIC1P78348 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC19.05■□□□□ 0.64
ASIC1P78348 MTDHP4-201ENST00000600287 670 ntBASIC19.05■□□□□ 0.64
ASIC1P78348 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
ASIC1P78348 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC19.05■□□□□ 0.64
ASIC1P78348 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ASIC1P78348 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ASIC1P78348 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC19.05■□□□□ 0.64
ASIC1P78348 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
ASIC1P78348 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC19.05■□□□□ 0.64
ASIC1P78348 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC19.05■□□□□ 0.64
ASIC1P78348 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ASIC1P78348 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
ASIC1P78348 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
ASIC1P78348 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ASIC1P78348 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ASIC1P78348 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC19.04■□□□□ 0.64
ASIC1P78348 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ASIC1P78348 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC19.04■□□□□ 0.64
ASIC1P78348 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
ASIC1P78348 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
ASIC1P78348 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC19.04■□□□□ 0.64
ASIC1P78348 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
ASIC1P78348 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC19.04■□□□□ 0.64
ASIC1P78348 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ASIC1P78348 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ASIC1P78348 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
ASIC1P78348 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ASIC1P78348 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
ASIC1P78348 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC19.04■□□□□ 0.64
ASIC1P78348 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC19.04■□□□□ 0.64
ASIC1P78348 SCARNA2-201ENST00000458748 420 ntBASIC19.04■□□□□ 0.64
ASIC1P78348 MSRA-206ENST00000521209 814 ntTSL 3 BASIC19.04■□□□□ 0.64
ASIC1P78348 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC19.04■□□□□ 0.64
ASIC1P78348 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms