Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.2■□□□□ 0.18
GABREP78334 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
GABREP78334 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
GABREP78334 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
GABREP78334 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
GABREP78334 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
GABREP78334 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
GABREP78334 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
GABREP78334 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
GABREP78334 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
GABREP78334 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
GABREP78334 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
GABREP78334 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC16.2■□□□□ 0.18
GABREP78334 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
GABREP78334 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.2■□□□□ 0.18
GABREP78334 SPCS2P4-201ENST00000436160 681 ntBASIC16.2■□□□□ 0.18
GABREP78334 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC16.2■□□□□ 0.18
GABREP78334 FAM207CP-201ENST00000443486 507 ntBASIC16.2■□□□□ 0.18
GABREP78334 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.2■□□□□ 0.18
GABREP78334 AL512638.1-201ENST00000457493 794 ntBASIC16.2■□□□□ 0.18
GABREP78334 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC16.2■□□□□ 0.18
GABREP78334 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.2■□□□□ 0.18
GABREP78334 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC16.2■□□□□ 0.18
GABREP78334 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.2■□□□□ 0.18
GABREP78334 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.2■□□□□ 0.18
GABREP78334 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC16.2■□□□□ 0.18
GABREP78334 MIR4515-201ENST00000584082 81 ntBASIC16.2■□□□□ 0.18
GABREP78334 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
GABREP78334 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
GABREP78334 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
GABREP78334 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
GABREP78334 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC16.2■□□□□ 0.18
GABREP78334 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
GABREP78334 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
GABREP78334 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
GABREP78334 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
GABREP78334 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
GABREP78334 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.19■□□□□ 0.18
GABREP78334 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GABREP78334 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GABREP78334 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
GABREP78334 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
GABREP78334 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GABREP78334 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
GABREP78334 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.19■□□□□ 0.18
GABREP78334 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
GABREP78334 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
GABREP78334 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
GABREP78334 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
GABREP78334 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
GABREP78334 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.19■□□□□ 0.18
GABREP78334 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.19■□□□□ 0.18
GABREP78334 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.19■□□□□ 0.18
GABREP78334 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.19■□□□□ 0.18
GABREP78334 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
GABREP78334 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.19■□□□□ 0.18
GABREP78334 SPDYE7P-202ENST00000420373 878 ntBASIC16.19■□□□□ 0.18
GABREP78334 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
GABREP78334 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
GABREP78334 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
GABREP78334 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.19■□□□□ 0.18
GABREP78334 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
GABREP78334 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.19■□□□□ 0.18
GABREP78334 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC16.19■□□□□ 0.18
GABREP78334 LINC02560-201ENST00000596379 459 ntBASIC16.19■□□□□ 0.18
GABREP78334 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC16.19■□□□□ 0.18
GABREP78334 AC008761.3-201ENST00000624803 892 ntBASIC16.19■□□□□ 0.18
GABREP78334 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC16.19■□□□□ 0.18
GABREP78334 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
GABREP78334 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
GABREP78334 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
GABREP78334 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.19■□□□□ 0.18
GABREP78334 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
GABREP78334 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.19■□□□□ 0.18
GABREP78334 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.19■□□□□ 0.18
GABREP78334 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GABREP78334 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GABREP78334 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
GABREP78334 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
GABREP78334 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
GABREP78334 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GABREP78334 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GABREP78334 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
GABREP78334 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
GABREP78334 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
GABREP78334 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
GABREP78334 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.18■□□□□ 0.18
GABREP78334 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
GABREP78334 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
GABREP78334 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
GABREP78334 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
GABREP78334 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GABREP78334 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.18■□□□□ 0.18
GABREP78334 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GABREP78334 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
GABREP78334 RAC2-204ENST00000406508 893 ntTSL 5 BASIC16.18■□□□□ 0.18
GABREP78334 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.18■□□□□ 0.18
GABREP78334 HLA-J-202ENST00000469281 1241 ntBASIC16.18■□□□□ 0.18
GABREP78334 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.18■□□□□ 0.18
GABREP78334 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms