Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
HIST1H3AP68431 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC14.93□□□□□ -0.02
HIST1H3AP68431 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HIST1H3AP68431 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC14.92□□□□□ -0.02
HIST1H3AP68431 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HIST1H3AP68431 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HIST1H3AP68431 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HIST1H3AP68431 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HIST1H3AP68431 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC14.92□□□□□ -0.02
HIST1H3AP68431 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HIST1H3AP68431 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HIST1H3AP68431 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC14.92□□□□□ -0.02
HIST1H3AP68431 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HIST1H3AP68431 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC14.92□□□□□ -0.02
HIST1H3AP68431 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HIST1H3AP68431 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HIST1H3AP68431 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HIST1H3AP68431 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC14.92□□□□□ -0.02
HIST1H3AP68431 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC14.92□□□□□ -0.02
HIST1H3AP68431 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC14.92□□□□□ -0.02
HIST1H3AP68431 ARTN-206ENST00000472435 402 ntTSL 3 BASIC14.92□□□□□ -0.02
HIST1H3AP68431 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HIST1H3AP68431 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC14.92□□□□□ -0.02
HIST1H3AP68431 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC14.92□□□□□ -0.02
HIST1H3AP68431 KRT18P56-201ENST00000507275 550 ntBASIC14.92□□□□□ -0.02
HIST1H3AP68431 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HIST1H3AP68431 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC14.92□□□□□ -0.02
HIST1H3AP68431 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC14.92□□□□□ -0.02
HIST1H3AP68431 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC14.92□□□□□ -0.02
HIST1H3AP68431 RNF151-202ENST00000569210 853 ntTSL 2 BASIC14.92□□□□□ -0.02
HIST1H3AP68431 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC14.92□□□□□ -0.02
HIST1H3AP68431 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC14.92□□□□□ -0.02
HIST1H3AP68431 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC14.92□□□□□ -0.02
HIST1H3AP68431 AC025062.2-201ENST00000605477 670 ntBASIC14.92□□□□□ -0.02
HIST1H3AP68431 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
HIST1H3AP68431 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
HIST1H3AP68431 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HIST1H3AP68431 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HIST1H3AP68431 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HIST1H3AP68431 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC14.92□□□□□ -0.02
HIST1H3AP68431 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC14.92□□□□□ -0.02
HIST1H3AP68431 PCDHB17P-201ENST00000539533 2393 ntBASIC14.92□□□□□ -0.02
HIST1H3AP68431 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HIST1H3AP68431 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
HIST1H3AP68431 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC14.92□□□□□ -0.02
HIST1H3AP68431 AC099398.1-201ENST00000567919 2776 ntBASIC14.92□□□□□ -0.02
HIST1H3AP68431 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
HIST1H3AP68431 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HIST1H3AP68431 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC14.92□□□□□ -0.02
HIST1H3AP68431 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HIST1H3AP68431 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
HIST1H3AP68431 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC14.92□□□□□ -0.02
HIST1H3AP68431 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC14.92□□□□□ -0.02
HIST1H3AP68431 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC14.92□□□□□ -0.02
HIST1H3AP68431 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HIST1H3AP68431 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC14.92□□□□□ -0.02
HIST1H3AP68431 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC14.92□□□□□ -0.02
HIST1H3AP68431 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HIST1H3AP68431 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
HIST1H3AP68431 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
HIST1H3AP68431 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HIST1H3AP68431 FLJ38576-201ENST00000623820 2459 ntBASIC14.91□□□□□ -0.02
HIST1H3AP68431 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
HIST1H3AP68431 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HIST1H3AP68431 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC14.91□□□□□ -0.02
HIST1H3AP68431 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HIST1H3AP68431 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HIST1H3AP68431 FOS-208ENST00000555686 1496 ntTSL 2 BASIC14.91□□□□□ -0.02
HIST1H3AP68431 RNF216P1-203ENST00000404404 2427 ntBASIC14.91□□□□□ -0.02
HIST1H3AP68431 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
HIST1H3AP68431 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC14.91□□□□□ -0.02
HIST1H3AP68431 AL021920.2-201ENST00000624828 1351 ntBASIC14.91□□□□□ -0.02
HIST1H3AP68431 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HIST1H3AP68431 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC14.91□□□□□ -0.02
HIST1H3AP68431 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HIST1H3AP68431 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HIST1H3AP68431 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC14.91□□□□□ -0.02
HIST1H3AP68431 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC14.91□□□□□ -0.02
HIST1H3AP68431 PAWRP1-201ENST00000451083 565 ntBASIC14.91□□□□□ -0.02
HIST1H3AP68431 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
HIST1H3AP68431 MSRA-206ENST00000521209 814 ntTSL 3 BASIC14.91□□□□□ -0.02
HIST1H3AP68431 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
HIST1H3AP68431 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC14.91□□□□□ -0.02
HIST1H3AP68431 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC14.91□□□□□ -0.02
HIST1H3AP68431 IRF8-202ENST00000562492 946 ntTSL 3 BASIC14.91□□□□□ -0.02
HIST1H3AP68431 AC021087.4-201ENST00000563761 564 ntBASIC14.91□□□□□ -0.02
HIST1H3AP68431 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC14.91□□□□□ -0.02
HIST1H3AP68431 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC14.91□□□□□ -0.02
HIST1H3AP68431 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC14.91□□□□□ -0.02
HIST1H3AP68431 IFNL4P1-201ENST00000607083 540 ntBASIC14.91□□□□□ -0.02
HIST1H3AP68431 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HIST1H3AP68431 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
HIST1H3AP68431 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HIST1H3AP68431 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC14.91□□□□□ -0.02
HIST1H3AP68431 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
HIST1H3AP68431 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
HIST1H3AP68431 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
HIST1H3AP68431 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC14.91□□□□□ -0.02
HIST1H3AP68431 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
HIST1H3AP68431 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms