Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
USP46P62068 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
USP46P62068 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
USP46P62068 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.94■□□□□ 0.46
USP46P62068 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.94■□□□□ 0.46
USP46P62068 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
USP46P62068 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
USP46P62068 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
USP46P62068 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.94■□□□□ 0.46
USP46P62068 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
USP46P62068 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.94■□□□□ 0.46
USP46P62068 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
USP46P62068 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.94■□□□□ 0.46
USP46P62068 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.94■□□□□ 0.46
USP46P62068 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.94■□□□□ 0.46
USP46P62068 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.94■□□□□ 0.46
USP46P62068 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.94■□□□□ 0.46
USP46P62068 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.94■□□□□ 0.46
USP46P62068 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.94■□□□□ 0.46
USP46P62068 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
USP46P62068 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC17.94■□□□□ 0.46
USP46P62068 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.94■□□□□ 0.46
USP46P62068 LINC00896-202ENST00000609602 2128 ntBASIC17.94■□□□□ 0.46
USP46P62068 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC17.94■□□□□ 0.46
USP46P62068 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
USP46P62068 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
USP46P62068 AL391005.1-201ENST00000623953 2435 ntBASIC17.94■□□□□ 0.46
USP46P62068 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.94■□□□□ 0.46
USP46P62068 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.94■□□□□ 0.46
USP46P62068 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC17.94■□□□□ 0.46
USP46P62068 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.94■□□□□ 0.46
USP46P62068 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
USP46P62068 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
USP46P62068 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.93■□□□□ 0.46
USP46P62068 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
USP46P62068 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
USP46P62068 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.93■□□□□ 0.46
USP46P62068 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
USP46P62068 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.93■□□□□ 0.46
USP46P62068 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
USP46P62068 CROCCP2-202ENST00000412962 2773 ntBASIC17.93■□□□□ 0.46
USP46P62068 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
USP46P62068 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
USP46P62068 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
USP46P62068 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.93■□□□□ 0.46
USP46P62068 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
USP46P62068 AC093525.9-201ENST00000624961 1746 ntBASIC17.93■□□□□ 0.46
USP46P62068 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
USP46P62068 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
USP46P62068 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.93■□□□□ 0.46
USP46P62068 EGFEM1P-202ENST00000431685 1563 ntBASIC17.93■□□□□ 0.46
USP46P62068 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
USP46P62068 AC016396.2-201ENST00000562575 1417 ntBASIC17.93■□□□□ 0.46
USP46P62068 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
USP46P62068 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
USP46P62068 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
USP46P62068 AC107918.2-201ENST00000530817 355 ntBASIC17.93■□□□□ 0.46
USP46P62068 PDPK2P-202ENST00000562415 1191 ntBASIC17.93■□□□□ 0.46
USP46P62068 MIR3687-2-201ENST00000577708 61 ntBASIC17.93■□□□□ 0.46
USP46P62068 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
USP46P62068 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.93■□□□□ 0.46
USP46P62068 MIR3687-1-201ENST00000614492 61 ntBASIC17.93■□□□□ 0.46
USP46P62068 AL691403.2-201ENST00000618460 490 ntBASIC17.93■□□□□ 0.46
USP46P62068 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
USP46P62068 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
USP46P62068 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.93■□□□□ 0.46
USP46P62068 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.93■□□□□ 0.46
USP46P62068 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
USP46P62068 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
USP46P62068 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
USP46P62068 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
USP46P62068 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.93■□□□□ 0.46
USP46P62068 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
USP46P62068 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
USP46P62068 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
USP46P62068 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
USP46P62068 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
USP46P62068 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
USP46P62068 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
USP46P62068 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
USP46P62068 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
USP46P62068 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
USP46P62068 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
USP46P62068 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.92■□□□□ 0.46
USP46P62068 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
USP46P62068 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
USP46P62068 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
USP46P62068 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
USP46P62068 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
USP46P62068 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.92■□□□□ 0.46
USP46P62068 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.92■□□□□ 0.46
USP46P62068 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.92■□□□□ 0.46
USP46P62068 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
USP46P62068 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.92■□□□□ 0.46
USP46P62068 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
USP46P62068 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.92■□□□□ 0.46
USP46P62068 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.92■□□□□ 0.46
USP46P62068 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.92■□□□□ 0.46
USP46P62068 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
USP46P62068 AC116353.5-201ENST00000638148 1699 ntBASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms